Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCSK9Q8NBP7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PCSK9Q8NBP7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.27■■■□□ 2.12
PCSK9Q8NBP7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCSK9Q8NBP7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCSK9Q8NBP7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.26■■■□□ 2.11
PCSK9Q8NBP7 AC129492.7-201ENST00000622992 756 ntBASIC28.26■■■□□ 2.11
PCSK9Q8NBP7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCSK9Q8NBP7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PCSK9Q8NBP7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PCSK9Q8NBP7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PCSK9Q8NBP7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PCSK9Q8NBP7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCSK9Q8NBP7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
PCSK9Q8NBP7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.25■■■□□ 2.11
PCSK9Q8NBP7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 AC133552.2-201ENST00000619106 1032 ntBASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.24■■■□□ 2.11
PCSK9Q8NBP7 AP004833.2-201ENST00000532228 1454 ntBASIC28.23■■■□□ 2.11
PCSK9Q8NBP7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCSK9Q8NBP7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCSK9Q8NBP7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCSK9Q8NBP7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PCSK9Q8NBP7 AL592293.1-201ENST00000502889 1188 ntBASIC28.22■■■□□ 2.11
PCSK9Q8NBP7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCSK9Q8NBP7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.22■■■□□ 2.11
PCSK9Q8NBP7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PCSK9Q8NBP7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.21■■■□□ 2.11
PCSK9Q8NBP7 AC009831.1-201ENST00000580420 1582 ntBASIC28.2■■■□□ 2.11
PCSK9Q8NBP7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PCSK9Q8NBP7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCSK9Q8NBP7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCSK9Q8NBP7 SMPD5-203ENST00000639008 1464 ntBASIC28.2■■■□□ 2.1
PCSK9Q8NBP7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.2■■■□□ 2.1
PCSK9Q8NBP7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCSK9Q8NBP7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCSK9Q8NBP7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PCSK9Q8NBP7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCSK9Q8NBP7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.18■■■□□ 2.1
PCSK9Q8NBP7 DUX4L18-201ENST00000553347 1267 ntBASIC28.18■■■□□ 2.1
PCSK9Q8NBP7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCSK9Q8NBP7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCSK9Q8NBP7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
PCSK9Q8NBP7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
PCSK9Q8NBP7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 AL359258.2-201ENST00000564063 1566 ntBASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCSK9Q8NBP7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCSK9Q8NBP7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
PCSK9Q8NBP7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCSK9Q8NBP7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCSK9Q8NBP7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.13■■■□□ 2.09
PCSK9Q8NBP7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.13■■■□□ 2.09
PCSK9Q8NBP7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
PCSK9Q8NBP7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.12■■■□□ 2.09
PCSK9Q8NBP7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCSK9Q8NBP7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.12■■■□□ 2.09
PCSK9Q8NBP7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
PCSK9Q8NBP7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PCSK9Q8NBP7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 AC026202.3-201ENST00000600805 1127 ntBASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.1■■■□□ 2.09
PCSK9Q8NBP7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.09■■■□□ 2.09
PCSK9Q8NBP7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.09■■■□□ 2.09
PCSK9Q8NBP7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCSK9Q8NBP7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.09■■■□□ 2.09
PCSK9Q8NBP7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
PCSK9Q8NBP7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCSK9Q8NBP7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCSK9Q8NBP7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCSK9Q8NBP7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PCSK9Q8NBP7 AC100797.4-201ENST00000631653 1827 ntBASIC28.06■■■□□ 2.08
PCSK9Q8NBP7 AC025884.2-201ENST00000553429 711 ntBASIC28.06■■■□□ 2.08
PCSK9Q8NBP7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms