Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ATPAF2Q8N5M1 BX255925.1-201ENST00000566954 1854 ntBASIC25.86■■□□□ 1.73
ATPAF2Q8N5M1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ATPAF2Q8N5M1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATPAF2Q8N5M1 LINC01003-201ENST00000564834 1764 ntBASIC25.85■■□□□ 1.73
ATPAF2Q8N5M1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATPAF2Q8N5M1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
ATPAF2Q8N5M1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATPAF2Q8N5M1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATPAF2Q8N5M1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATPAF2Q8N5M1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ATPAF2Q8N5M1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ATPAF2Q8N5M1 CR559946.2-201ENST00000623684 991 ntBASIC25.83■■□□□ 1.73
ATPAF2Q8N5M1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ATPAF2Q8N5M1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
ATPAF2Q8N5M1 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.82■■□□□ 1.72
ATPAF2Q8N5M1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.82■■□□□ 1.72
ATPAF2Q8N5M1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATPAF2Q8N5M1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATPAF2Q8N5M1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.81■■□□□ 1.72
ATPAF2Q8N5M1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATPAF2Q8N5M1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATPAF2Q8N5M1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATPAF2Q8N5M1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATPAF2Q8N5M1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
ATPAF2Q8N5M1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATPAF2Q8N5M1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ATPAF2Q8N5M1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.79■■□□□ 1.72
ATPAF2Q8N5M1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
ATPAF2Q8N5M1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
ATPAF2Q8N5M1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATPAF2Q8N5M1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATPAF2Q8N5M1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATPAF2Q8N5M1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATPAF2Q8N5M1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATPAF2Q8N5M1 MIR3648-2-201ENST00000581792 180 ntBASIC25.77■■□□□ 1.72
ATPAF2Q8N5M1 MIR3648-1-201ENST00000615959 180 ntBASIC25.77■■□□□ 1.72
ATPAF2Q8N5M1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.77■■□□□ 1.72
ATPAF2Q8N5M1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.76■■□□□ 1.71
ATPAF2Q8N5M1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
ATPAF2Q8N5M1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATPAF2Q8N5M1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATPAF2Q8N5M1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
ATPAF2Q8N5M1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ATPAF2Q8N5M1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 AC008813.1-201ENST00000536597 885 ntBASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATPAF2Q8N5M1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
ATPAF2Q8N5M1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATPAF2Q8N5M1 AC016575.1-201ENST00000607026 382 ntBASIC25.72■■□□□ 1.71
ATPAF2Q8N5M1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATPAF2Q8N5M1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATPAF2Q8N5M1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
ATPAF2Q8N5M1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATPAF2Q8N5M1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATPAF2Q8N5M1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.7■■□□□ 1.71
ATPAF2Q8N5M1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
ATPAF2Q8N5M1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATPAF2Q8N5M1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATPAF2Q8N5M1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATPAF2Q8N5M1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.7■■□□□ 1.7
ATPAF2Q8N5M1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.69■■□□□ 1.7
ATPAF2Q8N5M1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATPAF2Q8N5M1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATPAF2Q8N5M1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.68■■□□□ 1.7
ATPAF2Q8N5M1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATPAF2Q8N5M1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATPAF2Q8N5M1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATPAF2Q8N5M1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ATPAF2Q8N5M1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATPAF2Q8N5M1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
ATPAF2Q8N5M1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
ATPAF2Q8N5M1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ATPAF2Q8N5M1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATPAF2Q8N5M1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
ATPAF2Q8N5M1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATPAF2Q8N5M1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.64■■□□□ 1.7
ATPAF2Q8N5M1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.64■■□□□ 1.69
ATPAF2Q8N5M1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.64■■□□□ 1.69
ATPAF2Q8N5M1 HLA-V-202ENST00000446817 847 ntBASIC25.63■■□□□ 1.69
ATPAF2Q8N5M1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.63■■□□□ 1.69
ATPAF2Q8N5M1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATPAF2Q8N5M1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATPAF2Q8N5M1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.62■■□□□ 1.69
ATPAF2Q8N5M1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATPAF2Q8N5M1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 AC148477.6-201ENST00000623746 465 ntBASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
ATPAF2Q8N5M1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATPAF2Q8N5M1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ATPAF2Q8N5M1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.6■■□□□ 1.69
ATPAF2Q8N5M1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms