Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 LINC01003-201ENST00000564834 1764 ntBASIC24.44■■□□□ 1.5
LRRC56Q8IYG6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
LRRC56Q8IYG6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
LRRC56Q8IYG6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LRRC56Q8IYG6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.42■■□□□ 1.5
LRRC56Q8IYG6 BX255925.1-201ENST00000566954 1854 ntBASIC24.42■■□□□ 1.5
LRRC56Q8IYG6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LRRC56Q8IYG6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.41■■□□□ 1.5
LRRC56Q8IYG6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
LRRC56Q8IYG6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
LRRC56Q8IYG6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRRC56Q8IYG6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
LRRC56Q8IYG6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRRC56Q8IYG6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRRC56Q8IYG6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
LRRC56Q8IYG6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
LRRC56Q8IYG6 AC016575.1-201ENST00000607026 382 ntBASIC24.39■■□□□ 1.49
LRRC56Q8IYG6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
LRRC56Q8IYG6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
LRRC56Q8IYG6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC56Q8IYG6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRRC56Q8IYG6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.36■■□□□ 1.49
LRRC56Q8IYG6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC56Q8IYG6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
LRRC56Q8IYG6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRRC56Q8IYG6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 AC008813.1-201ENST00000536597 885 ntBASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRC56Q8IYG6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
LRRC56Q8IYG6 HLA-V-202ENST00000446817 847 ntBASIC24.33■■□□□ 1.49
LRRC56Q8IYG6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LRRC56Q8IYG6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.33■■□□□ 1.48
LRRC56Q8IYG6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
LRRC56Q8IYG6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRRC56Q8IYG6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC56Q8IYG6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRRC56Q8IYG6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRRC56Q8IYG6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRRC56Q8IYG6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRRC56Q8IYG6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.3■■□□□ 1.48
LRRC56Q8IYG6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRRC56Q8IYG6 AC148477.6-201ENST00000623746 465 ntBASIC24.28■■□□□ 1.48
LRRC56Q8IYG6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.28■■□□□ 1.48
LRRC56Q8IYG6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
LRRC56Q8IYG6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRRC56Q8IYG6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
LRRC56Q8IYG6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRRC56Q8IYG6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LRRC56Q8IYG6 MIR639-201ENST00000384974 98 ntBASIC24.26■■□□□ 1.47
LRRC56Q8IYG6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.26■■□□□ 1.47
LRRC56Q8IYG6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
LRRC56Q8IYG6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRC56Q8IYG6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC56Q8IYG6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.24■■□□□ 1.47
LRRC56Q8IYG6 MIR219A2-201ENST00000608502 1504 ntBASIC24.24■■□□□ 1.47
LRRC56Q8IYG6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRC56Q8IYG6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC56Q8IYG6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRC56Q8IYG6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC56Q8IYG6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC56Q8IYG6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRC56Q8IYG6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC56Q8IYG6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LRRC56Q8IYG6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRC56Q8IYG6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.21■■□□□ 1.47
LRRC56Q8IYG6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
LRRC56Q8IYG6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LRRC56Q8IYG6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LRRC56Q8IYG6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
LRRC56Q8IYG6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
LRRC56Q8IYG6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
LRRC56Q8IYG6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms