Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD3Q7Z407 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 AL592293.1-201ENST00000502889 1188 ntBASIC17.87■□□□□ 0.45
CSMD3Q7Z407 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD3Q7Z407 DUX4L9-201ENST00000449051 1259 ntBASIC17.87■□□□□ 0.45
CSMD3Q7Z407 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CSMD3Q7Z407 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 AC009299.2-201ENST00000482477 511 ntBASIC17.85■□□□□ 0.45
CSMD3Q7Z407 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CSMD3Q7Z407 DUX4L18-201ENST00000553347 1267 ntBASIC17.85■□□□□ 0.45
CSMD3Q7Z407 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 ECEL1P2-201ENST00000461596 1295 ntBASIC17.84■□□□□ 0.45
CSMD3Q7Z407 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD3Q7Z407 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSMD3Q7Z407 AC009831.1-201ENST00000580420 1582 ntBASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 KRT8P33-201ENST00000508125 1423 ntBASIC17.82■□□□□ 0.44
CSMD3Q7Z407 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSMD3Q7Z407 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 MIR935-201ENST00000401179 91 ntBASIC17.81■□□□□ 0.44
CSMD3Q7Z407 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CSMD3Q7Z407 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC131212.1-201ENST00000613771 668 ntBASIC17.8■□□□□ 0.44
CSMD3Q7Z407 AC133552.2-201ENST00000619106 1032 ntBASIC17.8■□□□□ 0.44
CSMD3Q7Z407 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CSMD3Q7Z407 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CSMD3Q7Z407 AC025884.2-201ENST00000553429 711 ntBASIC17.79■□□□□ 0.44
CSMD3Q7Z407 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 RAP2CP1-202ENST00000605179 643 ntBASIC17.78■□□□□ 0.44
CSMD3Q7Z407 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.78■□□□□ 0.44
CSMD3Q7Z407 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.77■□□□□ 0.44
CSMD3Q7Z407 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSMD3Q7Z407 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSMD3Q7Z407 THA1P-201ENST00000590384 1145 ntBASIC17.76■□□□□ 0.43
CSMD3Q7Z407 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.75■□□□□ 0.43
CSMD3Q7Z407 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 SPCS2P3-201ENST00000500401 656 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 AC026202.3-201ENST00000600805 1127 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 GUSBP5-201ENST00000418136 578 ntBASIC17.74■□□□□ 0.43
CSMD3Q7Z407 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSMD3Q7Z407 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 AC103834.1-201ENST00000520383 144 ntBASIC17.73■□□□□ 0.43
CSMD3Q7Z407 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 RP9P-202ENST00000450133 1212 ntBASIC17.73■□□□□ 0.43
CSMD3Q7Z407 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSMD3Q7Z407 AC010980.1-201ENST00000587192 1142 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms