Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AC079834.2-201ENST00000609776 1949 ntBASIC12.53□□□□□ -0.4
LINC01554Q52M75 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01554Q52M75 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC01554Q52M75 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01554Q52M75 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
LINC01554Q52M75 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01554Q52M75 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01554Q52M75 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01554Q52M75 AC093323.1-202ENST00000635031 2045 ntBASIC12.52□□□□□ -0.4
LINC01554Q52M75 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01554Q52M75 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01554Q52M75 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01554Q52M75 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01554Q52M75 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01554Q52M75 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01554Q52M75 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01554Q52M75 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01554Q52M75 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01554Q52M75 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01554Q52M75 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01554Q52M75 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01554Q52M75 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01554Q52M75 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01554Q52M75 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01554Q52M75 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LINC01554Q52M75 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
LINC01554Q52M75 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 AC012676.1-201ENST00000574705 1949 ntBASIC12.48□□□□□ -0.41
LINC01554Q52M75 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01554Q52M75 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01554Q52M75 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01554Q52M75 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC01554Q52M75 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC01554Q52M75 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01554Q52M75 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01554Q52M75 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LINC01554Q52M75 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01554Q52M75 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01554Q52M75 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01554Q52M75 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01554Q52M75 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC01554Q52M75 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01554Q52M75 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01554Q52M75 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms