Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
GABREP78334 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.16■■□□□ 1.46
GABREP78334 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
GABREP78334 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.16■■□□□ 1.46
GABREP78334 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
GABREP78334 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.15■■□□□ 1.46
GABREP78334 AL157400.5-201ENST00000507624 621 ntBASIC24.14■■□□□ 1.45
GABREP78334 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.14■■□□□ 1.45
GABREP78334 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.14■■□□□ 1.45
GABREP78334 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
GABREP78334 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
GABREP78334 AC129492.7-201ENST00000622992 756 ntBASIC24.13■■□□□ 1.45
GABREP78334 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
GABREP78334 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.12■■□□□ 1.45
GABREP78334 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.12■■□□□ 1.45
GABREP78334 AC007029.1-201ENST00000604183 313 ntBASIC24.12■■□□□ 1.45
GABREP78334 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
GABREP78334 DUX4L18-201ENST00000553347 1267 ntBASIC24.11■■□□□ 1.45
GABREP78334 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
GABREP78334 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
GABREP78334 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.11■■□□□ 1.45
GABREP78334 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.1■■□□□ 1.45
GABREP78334 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
GABREP78334 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GABREP78334 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GABREP78334 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
GABREP78334 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.1■■□□□ 1.45
GABREP78334 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
GABREP78334 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GABREP78334 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.09■■□□□ 1.45
GABREP78334 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.09■■□□□ 1.45
GABREP78334 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
GABREP78334 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
GABREP78334 AL592293.1-201ENST00000502889 1188 ntBASIC24.08■■□□□ 1.45
GABREP78334 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
GABREP78334 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GABREP78334 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GABREP78334 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GABREP78334 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GABREP78334 AC133552.2-201ENST00000619106 1032 ntBASIC24.07■■□□□ 1.44
GABREP78334 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GABREP78334 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GABREP78334 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
GABREP78334 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GABREP78334 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.06■■□□□ 1.44
GABREP78334 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
GABREP78334 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
GABREP78334 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.06■■□□□ 1.44
GABREP78334 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GABREP78334 AC009831.1-201ENST00000580420 1582 ntBASIC24.06■■□□□ 1.44
GABREP78334 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
GABREP78334 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
GABREP78334 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.04■■□□□ 1.44
GABREP78334 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GABREP78334 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GABREP78334 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GABREP78334 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.03■■□□□ 1.44
GABREP78334 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GABREP78334 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.03■■□□□ 1.44
GABREP78334 AL035685.1-201ENST00000636663 812 ntBASIC24.02■■□□□ 1.44
GABREP78334 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.02■■□□□ 1.44
GABREP78334 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
GABREP78334 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.01■■□□□ 1.43
GABREP78334 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
GABREP78334 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
GABREP78334 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
GABREP78334 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.99■■□□□ 1.43
GABREP78334 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
GABREP78334 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
GABREP78334 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
GABREP78334 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
GABREP78334 SMPD5-203ENST00000639008 1464 ntBASIC23.99■■□□□ 1.43
GABREP78334 AL451085.2-201ENST00000605085 799 ntBASIC23.98■■□□□ 1.43
GABREP78334 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GABREP78334 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
GABREP78334 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.97■■□□□ 1.43
GABREP78334 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
GABREP78334 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
GABREP78334 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
GABREP78334 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GABREP78334 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
GABREP78334 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GABREP78334 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
GABREP78334 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.96■■□□□ 1.43
GABREP78334 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
GABREP78334 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
GABREP78334 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.95■■□□□ 1.42
GABREP78334 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.95■■□□□ 1.42
GABREP78334 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.94■■□□□ 1.42
GABREP78334 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
GABREP78334 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
GABREP78334 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
GABREP78334 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
GABREP78334 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.93■■□□□ 1.42
GABREP78334 AL359258.2-201ENST00000564063 1566 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms