Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HIST1H3AP68431 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HIST1H3AP68431 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
HIST1H3AP68431 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HIST1H3AP68431 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22■■□□□ 1.11
HIST1H3AP68431 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HIST1H3AP68431 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HIST1H3AP68431 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H3AP68431 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HIST1H3AP68431 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H3AP68431 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H3AP68431 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.99■■□□□ 1.11
HIST1H3AP68431 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H3AP68431 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HIST1H3AP68431 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIST1H3AP68431 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIST1H3AP68431 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.98■■□□□ 1.11
HIST1H3AP68431 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST1H3AP68431 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H3AP68431 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H3AP68431 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.96■■□□□ 1.11
HIST1H3AP68431 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H3AP68431 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H3AP68431 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST1H3AP68431 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H3AP68431 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HIST1H3AP68431 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L13-201ENST00000554103 1267 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L15-201ENST00000611059 1267 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L23-201ENST00000615195 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L24-201ENST00000617576 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L22-201ENST00000618238 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L20-201ENST00000619712 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L21-201ENST00000622058 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L10-201ENST00000622460 1267 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 DUX4L25-201ENST00000624915 1269 ntBASIC21.95■■□□□ 1.1
HIST1H3AP68431 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HIST1H3AP68431 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST1H3AP68431 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.94■■□□□ 1.1
HIST1H3AP68431 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST1H3AP68431 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H3AP68431 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H3AP68431 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H3AP68431 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST1H3AP68431 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST1H3AP68431 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HIST1H3AP68431 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HIST1H3AP68431 ZNRF2P2-203ENST00000454624 420 ntBASIC21.93■■□□□ 1.1
HIST1H3AP68431 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.92■■□□□ 1.1
HIST1H3AP68431 DUX4L11-201ENST00000611504 1267 ntBASIC21.92■■□□□ 1.1
HIST1H3AP68431 DUX4L12-201ENST00000614593 1267 ntBASIC21.92■■□□□ 1.1
HIST1H3AP68431 DUX4L14-201ENST00000621227 1267 ntBASIC21.92■■□□□ 1.1
HIST1H3AP68431 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HIST1H3AP68431 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST1H3AP68431 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H3AP68431 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
HIST1H3AP68431 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H3AP68431 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H3AP68431 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H3AP68431 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST1H3AP68431 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H3AP68431 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H3AP68431 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST1H3AP68431 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HIST1H3AP68431 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.89■■□□□ 1.1
HIST1H3AP68431 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HIST1H3AP68431 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HIST1H3AP68431 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HIST1H3AP68431 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST1H3AP68431 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST1H3AP68431 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HIST1H3AP68431 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST1H3AP68431 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
HIST1H3AP68431 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.87■■□□□ 1.09
HIST1H3AP68431 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H3AP68431 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.87■■□□□ 1.09
HIST1H3AP68431 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H3AP68431 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
HIST1H3AP68431 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST1H3AP68431 ABHD17AP4-201ENST00000411545 909 ntBASIC21.86■■□□□ 1.09
HIST1H3AP68431 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H3AP68431 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST1H3AP68431 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST1H3AP68431 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H3AP68431 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H3AP68431 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST1H3AP68431 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H3AP68431 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST1H3AP68431 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H3AP68431 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms