Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RAB11AP62491 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11AP62491 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11AP62491 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB11AP62491 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB11AP62491 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB11AP62491 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11AP62491 AL391121.1-201ENST00000607967 1349 ntBASIC20.2■□□□□ 0.82
RAB11AP62491 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11AP62491 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB11AP62491 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11AP62491 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11AP62491 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB11AP62491 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.19■□□□□ 0.82
RAB11AP62491 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RAB11AP62491 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB11AP62491 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RAB11AP62491 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11AP62491 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RAB11AP62491 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11AP62491 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11AP62491 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RAB11AP62491 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB11AP62491 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAB11AP62491 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAB11AP62491 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB11AP62491 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11AP62491 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11AP62491 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11AP62491 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RAB11AP62491 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB11AP62491 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11AP62491 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11AP62491 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11AP62491 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11AP62491 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11AP62491 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.15■□□□□ 0.82
RAB11AP62491 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11AP62491 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB11AP62491 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11AP62491 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB11AP62491 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB11AP62491 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB11AP62491 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB11AP62491 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB11AP62491 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB11AP62491 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB11AP62491 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB11AP62491 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RAB11AP62491 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB11AP62491 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RAB11AP62491 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB11AP62491 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RAB11AP62491 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAB11AP62491 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11AP62491 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RAB11AP62491 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11AP62491 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11AP62491 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB11AP62491 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB11AP62491 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB11AP62491 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB11AP62491 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
RAB11AP62491 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RAB11AP62491 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB11AP62491 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAB11AP62491 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB11AP62491 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RAB11AP62491 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB11AP62491 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RAB11AP62491 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB11AP62491 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAB11AP62491 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB11AP62491 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB11AP62491 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB11AP62491 CAHM-201ENST00000604200 896 ntBASIC20.07■□□□□ 0.8
RAB11AP62491 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB11AP62491 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB11AP62491 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RAB11AP62491 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB11AP62491 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB11AP62491 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 AC018358.1-201ENST00000631079 1402 ntBASIC20.06■□□□□ 0.8
RAB11AP62491 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB11AP62491 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB11AP62491 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB11AP62491 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.05■□□□□ 0.8
RAB11AP62491 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB11AP62491 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RAB11AP62491 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB11AP62491 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB11AP62491 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB11AP62491 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAB11AP62491 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAB11AP62491 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB11AP62491 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms