Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRRX1P54821 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.62■□□□□ 0.89
PRRX1P54821 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRRX1P54821 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRRX1P54821 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRRX1P54821 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PRRX1P54821 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRRX1P54821 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRRX1P54821 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRRX1P54821 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.6■□□□□ 0.89
PRRX1P54821 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRRX1P54821 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRRX1P54821 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRRX1P54821 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRRX1P54821 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.59■□□□□ 0.89
PRRX1P54821 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRRX1P54821 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.59■□□□□ 0.89
PRRX1P54821 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRRX1P54821 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRRX1P54821 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.59■□□□□ 0.89
PRRX1P54821 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRRX1P54821 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRRX1P54821 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRRX1P54821 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.58■□□□□ 0.89
PRRX1P54821 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.58■□□□□ 0.89
PRRX1P54821 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRRX1P54821 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
PRRX1P54821 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRRX1P54821 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRRX1P54821 AC008813.1-201ENST00000536597 885 ntBASIC20.57■□□□□ 0.88
PRRX1P54821 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRRX1P54821 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRRX1P54821 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.57■□□□□ 0.88
PRRX1P54821 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRRX1P54821 MIR3648-2-201ENST00000581792 180 ntBASIC20.56■□□□□ 0.88
PRRX1P54821 MIR3648-1-201ENST00000615959 180 ntBASIC20.56■□□□□ 0.88
PRRX1P54821 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.56■□□□□ 0.88
PRRX1P54821 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRRX1P54821 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRRX1P54821 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRRX1P54821 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRRX1P54821 AC018358.1-201ENST00000631079 1402 ntBASIC20.55■□□□□ 0.88
PRRX1P54821 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRRX1P54821 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRRX1P54821 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRRX1P54821 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.55■□□□□ 0.88
PRRX1P54821 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRRX1P54821 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.54■□□□□ 0.88
PRRX1P54821 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRRX1P54821 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRRX1P54821 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.53■□□□□ 0.88
PRRX1P54821 BX255925.1-201ENST00000566954 1854 ntBASIC20.53■□□□□ 0.88
PRRX1P54821 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRRX1P54821 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PRRX1P54821 CR559946.2-201ENST00000623684 991 ntBASIC20.52■□□□□ 0.88
PRRX1P54821 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRRX1P54821 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRRX1P54821 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRRX1P54821 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRRX1P54821 LINC01003-201ENST00000564834 1764 ntBASIC20.51■□□□□ 0.87
PRRX1P54821 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRRX1P54821 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRRX1P54821 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRRX1P54821 AC016575.1-201ENST00000607026 382 ntBASIC20.5■□□□□ 0.87
PRRX1P54821 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRRX1P54821 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRRX1P54821 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRRX1P54821 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRRX1P54821 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRRX1P54821 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRRX1P54821 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRRX1P54821 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRRX1P54821 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRRX1P54821 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRRX1P54821 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRRX1P54821 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRRX1P54821 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRRX1P54821 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PRRX1P54821 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRRX1P54821 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRRX1P54821 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.46■□□□□ 0.87
PRRX1P54821 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.46■□□□□ 0.87
PRRX1P54821 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRRX1P54821 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRRX1P54821 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRRX1P54821 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRRX1P54821 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRRX1P54821 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRRX1P54821 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.45■□□□□ 0.86
PRRX1P54821 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRRX1P54821 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRRX1P54821 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRRX1P54821 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRRX1P54821 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PRRX1P54821 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.42■□□□□ 0.86
PRRX1P54821 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRRX1P54821 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRRX1P54821 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.41■□□□□ 0.86
PRRX1P54821 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRRX1P54821 AC148477.6-201ENST00000623746 465 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms