Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 SNA3YJL151C 402 nt7.93□□□□□ -1.14
SUB1P54000 YLR460CYLR460C 1131 nt7.93□□□□□ -1.14
SUB1P54000 ENO1YGR254W 1314 nt7.93□□□□□ -1.14
SUB1P54000 SAM50YNL026W 1455 nt7.93□□□□□ -1.14
SUB1P54000 AQR1YNL065W 1761 nt7.92□□□□□ -1.14
SUB1P54000 MET22YOL064C 1074 nt7.92□□□□□ -1.14
SUB1P54000 POB3YML069W 1659 nt7.92□□□□□ -1.14
SUB1P54000 LAG2YOL025W 1983 nt7.91□□□□□ -1.14
SUB1P54000 SNP1YIL061C 903 nt7.91□□□□□ -1.14
SUB1P54000 TES1YJR019C 1050 nt7.91□□□□□ -1.14
SUB1P54000 CDA1YLR307W 906 nt7.91□□□□□ -1.14
SUB1P54000 OLA1YBR025C 1185 nt7.91□□□□□ -1.14
SUB1P54000 RPO26YPR187W 468 nt7.91□□□□□ -1.14
SUB1P54000 IVY1YDR229W 1362 nt7.91□□□□□ -1.14
SUB1P54000 ICL2YPR006C 1728 nt7.9□□□□□ -1.14
SUB1P54000 MOB1YIL106W 945 nt7.9□□□□□ -1.14
SUB1P54000 RUP1YOR138C 2016 nt7.9□□□□□ -1.15
SUB1P54000 NCS6YGL211W 1080 nt7.89□□□□□ -1.15
SUB1P54000 HIS7YBR248C 1659 nt7.89□□□□□ -1.15
SUB1P54000 YKR018CYKR018C 2178 nt7.88□□□□□ -1.15
SUB1P54000 PET18YCR020C 648 nt7.88□□□□□ -1.15
SUB1P54000 YER137CYER137C 447 nt7.88□□□□□ -1.15
SUB1P54000 CHS7YHR142W 951 nt7.88□□□□□ -1.15
SUB1P54000 DRS1YLL008W 2259 nt7.87□□□□□ -1.15
SUB1P54000 MAL31YBR298C 1845 nt7.87□□□□□ -1.15
SUB1P54000 DEF1YKL054C 2217 nt7.87□□□□□ -1.15
SUB1P54000 HXT8YJL214W 1710 nt7.87□□□□□ -1.15
SUB1P54000 SHC1YER096W 1539 nt7.87□□□□□ -1.15
SUB1P54000 CHL4YDR254W 1377 nt7.86□□□□□ -1.15
SUB1P54000 RIX7YLL034C 2514 nt7.86□□□□□ -1.15
SUB1P54000 YBL113CYBL113C 2379 nt7.85□□□□□ -1.15
SUB1P54000 THI73YLR004C 1572 nt7.85□□□□□ -1.15
SUB1P54000 YHL030W-AYHL030W-A 462 nt7.85□□□□□ -1.15
SUB1P54000 ERP2YAL007C 648 nt7.85□□□□□ -1.15
SUB1P54000 RHO1YPR165W 630 nt7.85□□□□□ -1.15
SUB1P54000 LEO1YOR123C 1395 nt7.84□□□□□ -1.15
SUB1P54000 IGD1YFR017C 588 nt7.84□□□□□ -1.15
SUB1P54000 ATG17YLR423C 1254 nt7.84□□□□□ -1.15
SUB1P54000 RCF2YNR018W 675 nt7.84□□□□□ -1.15
SUB1P54000 YBL111CYBL111C 2004 nt7.84□□□□□ -1.15
SUB1P54000 BNA5YLR231C 1362 nt7.84□□□□□ -1.16
SUB1P54000 RPL12BYDR418W 498 nt7.83□□□□□ -1.16
SUB1P54000 GNA1YFL017C 480 nt7.83□□□□□ -1.16
SUB1P54000 PDC6YGR087C 1692 nt7.83□□□□□ -1.16
SUB1P54000 BNA3YJL060W 1335 nt7.82□□□□□ -1.16
SUB1P54000 SLX5YDL013W 1860 nt7.82□□□□□ -1.16
SUB1P54000 SRP101YDR292C 1866 nt7.82□□□□□ -1.16
SUB1P54000 SOH1YGL127C 384 nt7.82□□□□□ -1.16
SUB1P54000 RMD8YFR048W 1989 nt7.81□□□□□ -1.16
SUB1P54000 PUP3YER094C 618 nt7.81□□□□□ -1.16
SUB1P54000 YER152W-AYER152W-A 567 nt7.81□□□□□ -1.16
SUB1P54000 EMW1YNL313C 2715 nt7.81□□□□□ -1.16
SUB1P54000 ERG12YMR208W 1332 nt7.8□□□□□ -1.16
SUB1P54000 HAM1YJR069C 594 nt7.8□□□□□ -1.16
SUB1P54000 YLR280CYLR280C 351 nt7.8□□□□□ -1.16
SUB1P54000 AOS1YPR180W 1044 nt7.8□□□□□ -1.16
SUB1P54000 OCH1YGL038C 1443 nt7.79□□□□□ -1.16
SUB1P54000 DCR2YLR361C 1737 nt7.79□□□□□ -1.16
SUB1P54000 IES1YFL013C 2079 nt7.79□□□□□ -1.16
SUB1P54000 SEC24YIL109C 2781 nt7.78□□□□□ -1.16
SUB1P54000 DST1YGL043W 930 nt7.78□□□□□ -1.16
SUB1P54000 YGL072CYGL072C 360 nt7.78□□□□□ -1.16
SUB1P54000 VPS65YLR322W 315 nt7.78□□□□□ -1.16
SUB1P54000 IMA2YOL157C 1770 nt7.78□□□□□ -1.16
SUB1P54000 ATG7YHR171W 1893 nt7.78□□□□□ -1.16
SUB1P54000 TKL2YBR117C 2046 nt7.76□□□□□ -1.17
SUB1P54000 TOD6YBL054W 1578 nt7.76□□□□□ -1.17
SUB1P54000 CDC23YHR166C 1881 nt7.75□□□□□ -1.17
SUB1P54000 HNM1YGL077C 1692 nt7.74□□□□□ -1.17
SUB1P54000 PPZ2YDR436W 2133 nt7.74□□□□□ -1.17
SUB1P54000 CAK1YFL029C 1107 nt7.74□□□□□ -1.17
SUB1P54000 CPD1YGR247W 720 nt7.74□□□□□ -1.17
SUB1P54000 FLX1YIL134W 936 nt7.74□□□□□ -1.17
SUB1P54000 YJL043WYJL043W 774 nt7.74□□□□□ -1.17
SUB1P54000 REC114YMR133W 1287 nt7.74□□□□□ -1.17
SUB1P54000 NPL6YMR091C 1308 nt7.74□□□□□ -1.17
SUB1P54000 ASN1YPR145W 1719 nt7.73□□□□□ -1.17
SUB1P54000 JJJ3YJR097W 519 nt7.73□□□□□ -1.17
SUB1P54000 MNN9YPL050C 1188 nt7.73□□□□□ -1.17
SUB1P54000 tA(AGC)DtA(AGC)D 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)FtA(AGC)F 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)GtA(AGC)G 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)HtA(AGC)H 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)JtA(AGC)J 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)K1tA(AGC)K1 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)K2tA(AGC)K2 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)LtA(AGC)L 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)M1tA(AGC)M1 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)M2tA(AGC)M2 73 nt7.72□□□□□ -1.17
SUB1P54000 tA(AGC)PtA(AGC)P 73 nt7.72□□□□□ -1.17
SUB1P54000 GTS1YGL181W 1191 nt7.72□□□□□ -1.17
SUB1P54000 YJL211CYJL211C 444 nt7.72□□□□□ -1.17
SUB1P54000 ERV25YML012W 636 nt7.72□□□□□ -1.17
SUB1P54000 SIT1YEL065W 1887 nt7.72□□□□□ -1.17
SUB1P54000 MSS116YDR194C 1995 nt7.71□□□□□ -1.17
SUB1P54000 ERO1YML130C 1692 nt7.71□□□□□ -1.18
SUB1P54000 TRR1YDR353W 960 nt7.71□□□□□ -1.18
SUB1P54000 CYC3YAL039C 810 nt7.71□□□□□ -1.18
SUB1P54000 SRP102YKL154W 735 nt7.71□□□□□ -1.18
SUB1P54000 VMS1YDR049W 1899 nt7.7□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms