Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TMEM253P0C7T8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.67■■□□□ 1.86
TMEM253P0C7T8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.67■■□□□ 1.86
TMEM253P0C7T8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.67■■□□□ 1.86
TMEM253P0C7T8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TMEM253P0C7T8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TMEM253P0C7T8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TMEM253P0C7T8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM253P0C7T8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TMEM253P0C7T8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM253P0C7T8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TMEM253P0C7T8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
TMEM253P0C7T8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TMEM253P0C7T8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM253P0C7T8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TMEM253P0C7T8 AL162393.1-201ENST00000437852 946 ntBASIC26.63■■□□□ 1.85
TMEM253P0C7T8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.63■■□□□ 1.85
TMEM253P0C7T8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.62■■□□□ 1.85
TMEM253P0C7T8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM253P0C7T8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
TMEM253P0C7T8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TMEM253P0C7T8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TMEM253P0C7T8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.61■■□□□ 1.85
TMEM253P0C7T8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.61■■□□□ 1.85
TMEM253P0C7T8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.61■■□□□ 1.85
TMEM253P0C7T8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.6■■□□□ 1.85
TMEM253P0C7T8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.6■■□□□ 1.85
TMEM253P0C7T8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
TMEM253P0C7T8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM253P0C7T8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.59■■□□□ 1.85
TMEM253P0C7T8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
TMEM253P0C7T8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TMEM253P0C7T8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM253P0C7T8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM253P0C7T8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM253P0C7T8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TMEM253P0C7T8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TMEM253P0C7T8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 AC044849.2-201ENST00000606596 710 ntBASIC26.57■■□□□ 1.84
TMEM253P0C7T8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TMEM253P0C7T8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM253P0C7T8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
TMEM253P0C7T8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM253P0C7T8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TMEM253P0C7T8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.55■■□□□ 1.84
TMEM253P0C7T8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TMEM253P0C7T8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.55■■□□□ 1.84
TMEM253P0C7T8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TMEM253P0C7T8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.55■■□□□ 1.84
TMEM253P0C7T8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.54■■□□□ 1.84
TMEM253P0C7T8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMEM253P0C7T8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TMEM253P0C7T8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.53■■□□□ 1.84
TMEM253P0C7T8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM253P0C7T8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM253P0C7T8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
TMEM253P0C7T8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMEM253P0C7T8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.52■■□□□ 1.84
TMEM253P0C7T8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM253P0C7T8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
TMEM253P0C7T8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM253P0C7T8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMEM253P0C7T8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
TMEM253P0C7T8 AC110285.7-201ENST00000624417 1536 ntBASIC26.51■■□□□ 1.83
TMEM253P0C7T8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.51■■□□□ 1.83
TMEM253P0C7T8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMEM253P0C7T8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.5■■□□□ 1.83
TMEM253P0C7T8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.5■■□□□ 1.83
TMEM253P0C7T8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.49■■□□□ 1.83
TMEM253P0C7T8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.49■■□□□ 1.83
TMEM253P0C7T8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
TMEM253P0C7T8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TMEM253P0C7T8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.48■■□□□ 1.83
TMEM253P0C7T8 AC091060.1-201ENST00000623524 1766 ntBASIC26.48■■□□□ 1.83
TMEM253P0C7T8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEM253P0C7T8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM253P0C7T8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TMEM253P0C7T8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.47■■□□□ 1.83
TMEM253P0C7T8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
TMEM253P0C7T8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TMEM253P0C7T8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
TMEM253P0C7T8 AC021231.2-201ENST00000594613 730 ntBASIC26.45■■□□□ 1.82
TMEM253P0C7T8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.44■■□□□ 1.82
TMEM253P0C7T8 AL449106.1-201ENST00000608517 1980 ntBASIC26.44■■□□□ 1.82
TMEM253P0C7T8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM253P0C7T8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM253P0C7T8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM253P0C7T8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TMEM253P0C7T8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TMEM253P0C7T8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TMEM253P0C7T8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms