Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.1■■□□□ 1.45
LINGO3P0C6S8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LINGO3P0C6S8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LINGO3P0C6S8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
LINGO3P0C6S8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
LINGO3P0C6S8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LINGO3P0C6S8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
LINGO3P0C6S8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LINGO3P0C6S8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.09■■□□□ 1.45
LINGO3P0C6S8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LINGO3P0C6S8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
LINGO3P0C6S8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LINGO3P0C6S8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.08■■□□□ 1.45
LINGO3P0C6S8 AP006261.1-201ENST00000584783 668 ntBASIC24.08■■□□□ 1.45
LINGO3P0C6S8 AC005559.1-201ENST00000589661 871 ntBASIC24.08■■□□□ 1.45
LINGO3P0C6S8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
LINGO3P0C6S8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LINGO3P0C6S8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
LINGO3P0C6S8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
LINGO3P0C6S8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LINGO3P0C6S8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LINGO3P0C6S8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LINGO3P0C6S8 AC091060.1-201ENST00000623524 1766 ntBASIC24.06■■□□□ 1.44
LINGO3P0C6S8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.06■■□□□ 1.44
LINGO3P0C6S8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.06■■□□□ 1.44
LINGO3P0C6S8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.06■■□□□ 1.44
LINGO3P0C6S8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LINGO3P0C6S8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 AC010864.1-201ENST00000609407 1511 ntBASIC24.05■■□□□ 1.44
LINGO3P0C6S8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LINGO3P0C6S8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LINGO3P0C6S8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LINGO3P0C6S8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LINGO3P0C6S8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LINGO3P0C6S8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.04■■□□□ 1.44
LINGO3P0C6S8 DUX4L28-201ENST00000623687 678 ntBASIC24.04■■□□□ 1.44
LINGO3P0C6S8 BX255925.1-201ENST00000566954 1854 ntBASIC24.04■■□□□ 1.44
LINGO3P0C6S8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.03■■□□□ 1.44
LINGO3P0C6S8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.03■■□□□ 1.44
LINGO3P0C6S8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LINGO3P0C6S8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LINGO3P0C6S8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LINGO3P0C6S8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LINGO3P0C6S8 MIR3665-201ENST00000578708 105 ntBASIC24.02■■□□□ 1.44
LINGO3P0C6S8 AC133561.1-201ENST00000568600 2415 ntBASIC24.02■■□□□ 1.44
LINGO3P0C6S8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LINGO3P0C6S8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LINGO3P0C6S8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LINGO3P0C6S8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LINGO3P0C6S8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24■■□□□ 1.43
LINGO3P0C6S8 AL162393.1-201ENST00000437852 946 ntBASIC24■■□□□ 1.43
LINGO3P0C6S8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
LINGO3P0C6S8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LINGO3P0C6S8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LINGO3P0C6S8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.99■■□□□ 1.43
LINGO3P0C6S8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.99■■□□□ 1.43
LINGO3P0C6S8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.98■■□□□ 1.43
LINGO3P0C6S8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.98■■□□□ 1.43
LINGO3P0C6S8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LINGO3P0C6S8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
LINGO3P0C6S8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.97■■□□□ 1.43
LINGO3P0C6S8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LINGO3P0C6S8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LINGO3P0C6S8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LINGO3P0C6S8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
LINGO3P0C6S8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LINGO3P0C6S8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.95■■□□□ 1.42
LINGO3P0C6S8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.94■■□□□ 1.42
LINGO3P0C6S8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LINGO3P0C6S8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.93■■□□□ 1.42
LINGO3P0C6S8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LINGO3P0C6S8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINGO3P0C6S8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINGO3P0C6S8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINGO3P0C6S8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINGO3P0C6S8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LINGO3P0C6S8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 AC087741.3-201ENST00000624270 1347 ntBASIC23.9■■□□□ 1.42
LINGO3P0C6S8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms