Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.9■■■□□ 2.22
HOXC6P09630 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.9■■■□□ 2.22
HOXC6P09630 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
HOXC6P09630 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.89■■■□□ 2.21
HOXC6P09630 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
HOXC6P09630 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.88■■■□□ 2.21
HOXC6P09630 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.87■■■□□ 2.21
HOXC6P09630 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.86■■■□□ 2.21
HOXC6P09630 RARRES2P1-201ENST00000474487 481 ntBASIC28.85■■■□□ 2.21
HOXC6P09630 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.85■■■□□ 2.21
HOXC6P09630 AC007029.1-201ENST00000604183 313 ntBASIC28.84■■■□□ 2.21
HOXC6P09630 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HOXC6P09630 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.83■■■□□ 2.21
HOXC6P09630 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.83■■■□□ 2.21
HOXC6P09630 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.83■■■□□ 2.21
HOXC6P09630 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.2
HOXC6P09630 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HOXC6P09630 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HOXC6P09630 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
HOXC6P09630 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HOXC6P09630 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
HOXC6P09630 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HOXC6P09630 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.82■■■□□ 2.2
HOXC6P09630 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.81■■■□□ 2.2
HOXC6P09630 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
HOXC6P09630 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HOXC6P09630 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
HOXC6P09630 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.8■■■□□ 2.2
HOXC6P09630 AC129492.7-201ENST00000622992 756 ntBASIC28.8■■■□□ 2.2
HOXC6P09630 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.79■■■□□ 2.2
HOXC6P09630 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HOXC6P09630 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HOXC6P09630 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
HOXC6P09630 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.78■■■□□ 2.2
HOXC6P09630 AP004833.2-201ENST00000532228 1454 ntBASIC28.78■■■□□ 2.2
HOXC6P09630 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
HOXC6P09630 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.78■■■□□ 2.2
HOXC6P09630 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
HOXC6P09630 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.77■■■□□ 2.2
HOXC6P09630 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
HOXC6P09630 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
HOXC6P09630 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
HOXC6P09630 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
HOXC6P09630 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
HOXC6P09630 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
HOXC6P09630 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
HOXC6P09630 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.75■■■□□ 2.19
HOXC6P09630 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.75■■■□□ 2.19
HOXC6P09630 AC009831.1-201ENST00000580420 1582 ntBASIC28.75■■■□□ 2.19
HOXC6P09630 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.74■■■□□ 2.19
HOXC6P09630 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
HOXC6P09630 AL592293.1-201ENST00000502889 1188 ntBASIC28.73■■■□□ 2.19
HOXC6P09630 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.72■■■□□ 2.19
HOXC6P09630 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
HOXC6P09630 AC133552.2-201ENST00000619106 1032 ntBASIC28.72■■■□□ 2.19
HOXC6P09630 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
HOXC6P09630 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
HOXC6P09630 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
HOXC6P09630 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
HOXC6P09630 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.71■■■□□ 2.19
HOXC6P09630 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.71■■■□□ 2.19
HOXC6P09630 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
HOXC6P09630 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.71■■■□□ 2.19
HOXC6P09630 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.71■■■□□ 2.19
HOXC6P09630 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
HOXC6P09630 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
HOXC6P09630 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.69■■■□□ 2.18
HOXC6P09630 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HOXC6P09630 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HOXC6P09630 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
HOXC6P09630 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
HOXC6P09630 SMPD5-203ENST00000639008 1464 ntBASIC28.68■■■□□ 2.18
HOXC6P09630 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
HOXC6P09630 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
HOXC6P09630 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.68■■■□□ 2.18
HOXC6P09630 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
HOXC6P09630 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.68■■■□□ 2.18
HOXC6P09630 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.18
HOXC6P09630 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
HOXC6P09630 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
HOXC6P09630 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
HOXC6P09630 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HOXC6P09630 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
HOXC6P09630 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.66■■■□□ 2.18
HOXC6P09630 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.66■■■□□ 2.18
HOXC6P09630 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
HOXC6P09630 DUX4L18-201ENST00000553347 1267 ntBASIC28.65■■■□□ 2.18
HOXC6P09630 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
HOXC6P09630 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.65■■■□□ 2.18
HOXC6P09630 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
HOXC6P09630 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.64■■■□□ 2.18
HOXC6P09630 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.64■■■□□ 2.18
HOXC6P09630 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
HOXC6P09630 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
HOXC6P09630 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms