Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH8O95206 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH8O95206 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDH8O95206 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDH8O95206 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH8O95206 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH8O95206 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDH8O95206 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH8O95206 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH8O95206 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDH8O95206 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH8O95206 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDH8O95206 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDH8O95206 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDH8O95206 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDH8O95206 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH8O95206 AC060814.1-201ENST00000554326 538 ntBASIC25.22■■□□□ 1.63
PCDH8O95206 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PCDH8O95206 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH8O95206 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDH8O95206 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDH8O95206 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH8O95206 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDH8O95206 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDH8O95206 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDH8O95206 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.2■■□□□ 1.63
PCDH8O95206 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDH8O95206 ABHD17AP5-201ENST00000580133 923 ntBASIC25.2■■□□□ 1.62
PCDH8O95206 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDH8O95206 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH8O95206 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH8O95206 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
PCDH8O95206 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDH8O95206 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH8O95206 AC126177.7-201ENST00000547904 679 ntBASIC25.18■■□□□ 1.62
PCDH8O95206 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDH8O95206 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH8O95206 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH8O95206 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH8O95206 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PCDH8O95206 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDH8O95206 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH8O95206 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDH8O95206 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PCDH8O95206 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDH8O95206 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDH8O95206 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDH8O95206 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PCDH8O95206 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH8O95206 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDH8O95206 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH8O95206 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH8O95206 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
PCDH8O95206 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH8O95206 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH8O95206 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH8O95206 AP002414.2-202ENST00000590929 1450 ntBASIC25.13■■□□□ 1.61
PCDH8O95206 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH8O95206 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PCDH8O95206 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH8O95206 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH8O95206 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH8O95206 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH8O95206 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PCDH8O95206 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH8O95206 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH8O95206 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH8O95206 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH8O95206 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PCDH8O95206 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PCDH8O95206 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH8O95206 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH8O95206 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDH8O95206 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
PCDH8O95206 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PCDH8O95206 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDH8O95206 AC092296.2-201ENST00000589470 999 ntBASIC25.07■■□□□ 1.6
PCDH8O95206 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDH8O95206 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH8O95206 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH8O95206 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDH8O95206 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH8O95206 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PCDH8O95206 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PCDH8O95206 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDH8O95206 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH8O95206 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDH8O95206 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PCDH8O95206 AC139426.1-201ENST00000568218 2529 ntBASIC25.04■■□□□ 1.6
PCDH8O95206 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms