Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RFPL1O75677 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RFPL1O75677 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RFPL1O75677 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFPL1O75677 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFPL1O75677 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFPL1O75677 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.23■■□□□ 1.63
RFPL1O75677 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.23■■□□□ 1.63
RFPL1O75677 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.23■■□□□ 1.63
RFPL1O75677 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFPL1O75677 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.23■■□□□ 1.63
RFPL1O75677 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFPL1O75677 AC135983.2-203ENST00000454486 1613 ntBASIC25.23■■□□□ 1.63
RFPL1O75677 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFPL1O75677 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RFPL1O75677 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RFPL1O75677 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.22■■□□□ 1.63
RFPL1O75677 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFPL1O75677 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RFPL1O75677 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.21■■□□□ 1.63
RFPL1O75677 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
RFPL1O75677 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
RFPL1O75677 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFPL1O75677 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFPL1O75677 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFPL1O75677 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFPL1O75677 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFPL1O75677 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RFPL1O75677 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RFPL1O75677 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.19■■□□□ 1.62
RFPL1O75677 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RFPL1O75677 AC018358.1-201ENST00000631079 1402 ntBASIC25.19■■□□□ 1.62
RFPL1O75677 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFPL1O75677 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFPL1O75677 AL449106.1-201ENST00000608517 1980 ntBASIC25.18■■□□□ 1.62
RFPL1O75677 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RFPL1O75677 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.18■■□□□ 1.62
RFPL1O75677 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.18■■□□□ 1.62
RFPL1O75677 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RFPL1O75677 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.18■■□□□ 1.62
RFPL1O75677 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.17■■□□□ 1.62
RFPL1O75677 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.17■■□□□ 1.62
RFPL1O75677 DUX4L29-201ENST00000425409 679 ntBASIC25.17■■□□□ 1.62
RFPL1O75677 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFPL1O75677 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFPL1O75677 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RFPL1O75677 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RFPL1O75677 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.16■■□□□ 1.62
RFPL1O75677 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RFPL1O75677 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.16■■□□□ 1.62
RFPL1O75677 WHAMMP2-203ENST00000563942 1603 ntBASIC25.15■■□□□ 1.62
RFPL1O75677 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
RFPL1O75677 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFPL1O75677 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RFPL1O75677 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
RFPL1O75677 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFPL1O75677 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFPL1O75677 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RFPL1O75677 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFPL1O75677 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RFPL1O75677 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.14■■□□□ 1.61
RFPL1O75677 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFPL1O75677 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFPL1O75677 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RFPL1O75677 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFPL1O75677 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.13■■□□□ 1.61
RFPL1O75677 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFPL1O75677 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RFPL1O75677 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.12■■□□□ 1.61
RFPL1O75677 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RFPL1O75677 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RFPL1O75677 AC091060.1-201ENST00000623524 1766 ntBASIC25.11■■□□□ 1.61
RFPL1O75677 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFPL1O75677 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RFPL1O75677 AC135731.1-201ENST00000569415 2548 ntBASIC25.11■■□□□ 1.61
RFPL1O75677 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.1■■□□□ 1.61
RFPL1O75677 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
RFPL1O75677 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RFPL1O75677 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFPL1O75677 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFPL1O75677 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFPL1O75677 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RFPL1O75677 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RFPL1O75677 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RFPL1O75677 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RFPL1O75677 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFPL1O75677 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
RFPL1O75677 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFPL1O75677 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RFPL1O75677 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.07■■□□□ 1.6
RFPL1O75677 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFPL1O75677 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.06■■□□□ 1.6
RFPL1O75677 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RFPL1O75677 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFPL1O75677 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFPL1O75677 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
RFPL1O75677 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFPL1O75677 MIR6090-201ENST00000622481 60 ntBASIC25.05■■□□□ 1.6
RFPL1O75677 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.05■■□□□ 1.6
RFPL1O75677 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms