Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.33■■□□□ 1.49
SNRNP200O75643 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRNP200O75643 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRNP200O75643 AC018358.1-201ENST00000631079 1402 ntBASIC24.31■■□□□ 1.48
SNRNP200O75643 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.31■■□□□ 1.48
SNRNP200O75643 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SNRNP200O75643 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SNRNP200O75643 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
SNRNP200O75643 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SNRNP200O75643 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SNRNP200O75643 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRNP200O75643 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.28■■□□□ 1.48
SNRNP200O75643 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SNRNP200O75643 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 MIR219A2-201ENST00000608502 1504 ntBASIC24.27■■□□□ 1.48
SNRNP200O75643 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNRNP200O75643 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.26■■□□□ 1.47
SNRNP200O75643 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNRNP200O75643 AC008813.1-201ENST00000536597 885 ntBASIC24.25■■□□□ 1.47
SNRNP200O75643 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SNRNP200O75643 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNRNP200O75643 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.25■■□□□ 1.47
SNRNP200O75643 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRNP200O75643 LINC01003-201ENST00000564834 1764 ntBASIC24.24■■□□□ 1.47
SNRNP200O75643 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNRNP200O75643 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SNRNP200O75643 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.23■■□□□ 1.47
SNRNP200O75643 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
SNRNP200O75643 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SNRNP200O75643 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.22■■□□□ 1.47
SNRNP200O75643 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.21■■□□□ 1.47
SNRNP200O75643 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.21■■□□□ 1.47
SNRNP200O75643 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
SNRNP200O75643 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.19■■□□□ 1.46
SNRNP200O75643 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.19■■□□□ 1.46
SNRNP200O75643 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SNRNP200O75643 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SNRNP200O75643 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
SNRNP200O75643 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.18■■□□□ 1.46
SNRNP200O75643 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
SNRNP200O75643 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 AC060814.1-201ENST00000554326 538 ntBASIC24.17■■□□□ 1.46
SNRNP200O75643 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.17■■□□□ 1.46
SNRNP200O75643 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SNRNP200O75643 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SNRNP200O75643 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
SNRNP200O75643 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.15■■□□□ 1.46
SNRNP200O75643 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SNRNP200O75643 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.14■■□□□ 1.46
SNRNP200O75643 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.14■■□□□ 1.46
SNRNP200O75643 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.14■■□□□ 1.46
SNRNP200O75643 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SNRNP200O75643 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.14■■□□□ 1.45
SNRNP200O75643 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNRNP200O75643 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.14■■□□□ 1.45
SNRNP200O75643 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SNRNP200O75643 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SNRNP200O75643 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SNRNP200O75643 HSD17B1P1-201ENST00000590052 955 ntBASIC24.13■■□□□ 1.45
SNRNP200O75643 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms