Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TSPAN3O60637 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.07■■□□□ 1.76
TSPAN3O60637 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.07■■□□□ 1.76
TSPAN3O60637 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TSPAN3O60637 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
TSPAN3O60637 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
TSPAN3O60637 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.07■■□□□ 1.76
TSPAN3O60637 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TSPAN3O60637 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.07■■□□□ 1.76
TSPAN3O60637 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TSPAN3O60637 GPX1-201ENST00000419349 1106 ntBASIC26.06■■□□□ 1.76
TSPAN3O60637 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.06■■□□□ 1.76
TSPAN3O60637 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
TSPAN3O60637 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TSPAN3O60637 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
TSPAN3O60637 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TSPAN3O60637 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
TSPAN3O60637 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TSPAN3O60637 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.03■■□□□ 1.76
TSPAN3O60637 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TSPAN3O60637 AC022413.1-201ENST00000624602 984 ntBASIC26.03■■□□□ 1.76
TSPAN3O60637 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TSPAN3O60637 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TSPAN3O60637 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TSPAN3O60637 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.02■■□□□ 1.76
TSPAN3O60637 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.01■■□□□ 1.75
TSPAN3O60637 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TSPAN3O60637 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.01■■□□□ 1.75
TSPAN3O60637 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TSPAN3O60637 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26■■□□□ 1.75
TSPAN3O60637 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
TSPAN3O60637 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TSPAN3O60637 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
TSPAN3O60637 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TSPAN3O60637 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TSPAN3O60637 AP002414.2-202ENST00000590929 1450 ntBASIC25.99■■□□□ 1.75
TSPAN3O60637 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
TSPAN3O60637 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TSPAN3O60637 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TSPAN3O60637 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.98■■□□□ 1.75
TSPAN3O60637 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
TSPAN3O60637 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TSPAN3O60637 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TSPAN3O60637 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TSPAN3O60637 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TSPAN3O60637 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TSPAN3O60637 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.96■■□□□ 1.75
TSPAN3O60637 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.96■■□□□ 1.75
TSPAN3O60637 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.96■■□□□ 1.75
TSPAN3O60637 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TSPAN3O60637 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TSPAN3O60637 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
TSPAN3O60637 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.95■■□□□ 1.74
TSPAN3O60637 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TSPAN3O60637 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TSPAN3O60637 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TSPAN3O60637 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TSPAN3O60637 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
TSPAN3O60637 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TSPAN3O60637 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TSPAN3O60637 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TSPAN3O60637 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TSPAN3O60637 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TSPAN3O60637 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.92■■□□□ 1.74
TSPAN3O60637 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TSPAN3O60637 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
TSPAN3O60637 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TSPAN3O60637 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TSPAN3O60637 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.9■■□□□ 1.74
TSPAN3O60637 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.9■■□□□ 1.74
TSPAN3O60637 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
TSPAN3O60637 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TSPAN3O60637 AC060814.1-201ENST00000554326 538 ntBASIC25.9■■□□□ 1.74
TSPAN3O60637 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.9■■□□□ 1.74
TSPAN3O60637 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TSPAN3O60637 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.9■■□□□ 1.74
TSPAN3O60637 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
TSPAN3O60637 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TSPAN3O60637 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
TSPAN3O60637 RARRES2P2-201ENST00000394842 485 ntBASIC25.88■■□□□ 1.73
TSPAN3O60637 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
TSPAN3O60637 RNF126P1-201ENST00000567452 1320 ntBASIC25.88■■□□□ 1.73
TSPAN3O60637 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TSPAN3O60637 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.87■■□□□ 1.73
TSPAN3O60637 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TSPAN3O60637 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TSPAN3O60637 DRD5P2-201ENST00000421395 2012 ntBASIC25.87■■□□□ 1.73
TSPAN3O60637 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TSPAN3O60637 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TSPAN3O60637 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TSPAN3O60637 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.86■■□□□ 1.73
TSPAN3O60637 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.86■■□□□ 1.73
TSPAN3O60637 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TSPAN3O60637 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
TSPAN3O60637 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN3O60637 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN3O60637 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TSPAN3O60637 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.85■■□□□ 1.73
TSPAN3O60637 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TSPAN3O60637 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms