Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SPTLC2O15270 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SPTLC2O15270 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SPTLC2O15270 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.69■■■□□ 2.18
SPTLC2O15270 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SPTLC2O15270 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPTLC2O15270 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.67■■■□□ 2.18
SPTLC2O15270 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPTLC2O15270 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SPTLC2O15270 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.67■■■□□ 2.18
SPTLC2O15270 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPTLC2O15270 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.66■■■□□ 2.18
SPTLC2O15270 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SPTLC2O15270 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPTLC2O15270 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.64■■■□□ 2.18
SPTLC2O15270 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SPTLC2O15270 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 AC021231.2-201ENST00000594613 730 ntBASIC28.62■■■□□ 2.17
SPTLC2O15270 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPTLC2O15270 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPTLC2O15270 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
SPTLC2O15270 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.6■■■□□ 2.17
SPTLC2O15270 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.6■■■□□ 2.17
SPTLC2O15270 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SPTLC2O15270 AC110285.7-201ENST00000624417 1536 ntBASIC28.59■■■□□ 2.17
SPTLC2O15270 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SPTLC2O15270 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SPTLC2O15270 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SPTLC2O15270 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
SPTLC2O15270 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.56■■■□□ 2.16
SPTLC2O15270 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.56■■■□□ 2.16
SPTLC2O15270 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.56■■■□□ 2.16
SPTLC2O15270 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.55■■■□□ 2.16
SPTLC2O15270 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 DUX4L29-201ENST00000425409 679 ntBASIC28.55■■■□□ 2.16
SPTLC2O15270 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPTLC2O15270 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPTLC2O15270 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.54■■■□□ 2.16
SPTLC2O15270 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPTLC2O15270 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
SPTLC2O15270 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPTLC2O15270 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPTLC2O15270 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.52■■■□□ 2.16
SPTLC2O15270 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.52■■■□□ 2.16
SPTLC2O15270 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.51■■■□□ 2.16
SPTLC2O15270 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.51■■■□□ 2.16
SPTLC2O15270 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SPTLC2O15270 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
SPTLC2O15270 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.5■■■□□ 2.15
SPTLC2O15270 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SPTLC2O15270 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPTLC2O15270 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.5■■■□□ 2.15
SPTLC2O15270 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPTLC2O15270 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SPTLC2O15270 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.49■■■□□ 2.15
SPTLC2O15270 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SPTLC2O15270 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.48■■■□□ 2.15
SPTLC2O15270 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPTLC2O15270 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SPTLC2O15270 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
SPTLC2O15270 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SPTLC2O15270 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
SPTLC2O15270 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.46■■■□□ 2.15
SPTLC2O15270 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
SPTLC2O15270 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPTLC2O15270 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
SPTLC2O15270 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.46■■■□□ 2.15
SPTLC2O15270 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.45■■■□□ 2.14
SPTLC2O15270 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.44■■■□□ 2.14
SPTLC2O15270 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SPTLC2O15270 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms