Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPK2O00526 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UPK2O00526 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
UPK2O00526 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.15■□□□□ 0.82
UPK2O00526 AL162393.1-201ENST00000437852 946 ntBASIC20.15■□□□□ 0.82
UPK2O00526 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK2O00526 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UPK2O00526 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
UPK2O00526 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.14■□□□□ 0.82
UPK2O00526 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UPK2O00526 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UPK2O00526 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.14■□□□□ 0.81
UPK2O00526 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.14■□□□□ 0.81
UPK2O00526 AC044849.2-201ENST00000606596 710 ntBASIC20.14■□□□□ 0.81
UPK2O00526 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK2O00526 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK2O00526 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
UPK2O00526 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK2O00526 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.13■□□□□ 0.81
UPK2O00526 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UPK2O00526 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK2O00526 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UPK2O00526 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.12■□□□□ 0.81
UPK2O00526 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPK2O00526 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UPK2O00526 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK2O00526 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK2O00526 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPK2O00526 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK2O00526 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPK2O00526 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.11■□□□□ 0.81
UPK2O00526 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPK2O00526 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK2O00526 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPK2O00526 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK2O00526 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK2O00526 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK2O00526 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPK2O00526 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UPK2O00526 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UPK2O00526 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK2O00526 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.09■□□□□ 0.81
UPK2O00526 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UPK2O00526 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPK2O00526 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPK2O00526 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UPK2O00526 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.08■□□□□ 0.81
UPK2O00526 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
UPK2O00526 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.08■□□□□ 0.8
UPK2O00526 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UPK2O00526 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK2O00526 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UPK2O00526 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
UPK2O00526 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
UPK2O00526 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.06■□□□□ 0.8
UPK2O00526 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UPK2O00526 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.06■□□□□ 0.8
UPK2O00526 AC110285.7-201ENST00000624417 1536 ntBASIC20.06■□□□□ 0.8
UPK2O00526 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UPK2O00526 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK2O00526 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UPK2O00526 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
UPK2O00526 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPK2O00526 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UPK2O00526 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.04■□□□□ 0.8
UPK2O00526 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.04■□□□□ 0.8
UPK2O00526 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.03■□□□□ 0.8
UPK2O00526 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
UPK2O00526 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.03■□□□□ 0.8
UPK2O00526 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.03■□□□□ 0.8
UPK2O00526 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.03■□□□□ 0.8
UPK2O00526 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPK2O00526 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.02■□□□□ 0.8
UPK2O00526 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
UPK2O00526 AC021231.2-201ENST00000594613 730 ntBASIC20.02■□□□□ 0.8
UPK2O00526 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPK2O00526 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPK2O00526 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPK2O00526 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.01■□□□□ 0.79
UPK2O00526 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UPK2O00526 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK2O00526 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPK2O00526 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.01■□□□□ 0.79
UPK2O00526 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPK2O00526 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UPK2O00526 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK2O00526 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UPK2O00526 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20■□□□□ 0.79
UPK2O00526 DUX4L29-201ENST00000425409 679 ntBASIC20■□□□□ 0.79
UPK2O00526 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPK2O00526 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UPK2O00526 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UPK2O00526 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK2O00526 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
UPK2O00526 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms