Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
LRRC53A6NM62 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.93
LRRC53A6NM62 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
LRRC53A6NM62 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
LRRC53A6NM62 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
LRRC53A6NM62 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.13■■□□□ 1.93
LRRC53A6NM62 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.13■■□□□ 1.93
LRRC53A6NM62 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LRRC53A6NM62 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.13■■□□□ 1.93
LRRC53A6NM62 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRRC53A6NM62 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.12■■□□□ 1.93
LRRC53A6NM62 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.12■■□□□ 1.93
LRRC53A6NM62 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
LRRC53A6NM62 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LRRC53A6NM62 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LRRC53A6NM62 AL162393.1-201ENST00000437852 946 ntBASIC27.11■■□□□ 1.93
LRRC53A6NM62 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
LRRC53A6NM62 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
LRRC53A6NM62 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LRRC53A6NM62 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.1■■□□□ 1.93
LRRC53A6NM62 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.1■■□□□ 1.93
LRRC53A6NM62 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LRRC53A6NM62 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LRRC53A6NM62 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.09■■□□□ 1.93
LRRC53A6NM62 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LRRC53A6NM62 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.08■■□□□ 1.93
LRRC53A6NM62 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.08■■□□□ 1.93
LRRC53A6NM62 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
LRRC53A6NM62 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.92
LRRC53A6NM62 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
LRRC53A6NM62 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
LRRC53A6NM62 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
LRRC53A6NM62 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.06■■□□□ 1.92
LRRC53A6NM62 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.06■■□□□ 1.92
LRRC53A6NM62 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
LRRC53A6NM62 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
LRRC53A6NM62 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
LRRC53A6NM62 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LRRC53A6NM62 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
LRRC53A6NM62 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.05■■□□□ 1.92
LRRC53A6NM62 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LRRC53A6NM62 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC53A6NM62 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LRRC53A6NM62 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC53A6NM62 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC53A6NM62 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LRRC53A6NM62 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC53A6NM62 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
LRRC53A6NM62 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRRC53A6NM62 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRRC53A6NM62 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.02■■□□□ 1.92
LRRC53A6NM62 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
LRRC53A6NM62 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.02■■□□□ 1.92
LRRC53A6NM62 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
LRRC53A6NM62 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC53A6NM62 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC53A6NM62 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.01■■□□□ 1.91
LRRC53A6NM62 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
LRRC53A6NM62 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC53A6NM62 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.01■■□□□ 1.91
LRRC53A6NM62 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
LRRC53A6NM62 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC53A6NM62 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27■■□□□ 1.91
LRRC53A6NM62 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC53A6NM62 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27■■□□□ 1.91
LRRC53A6NM62 AC044849.2-201ENST00000606596 710 ntBASIC27■■□□□ 1.91
LRRC53A6NM62 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC53A6NM62 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRRC53A6NM62 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
LRRC53A6NM62 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRRC53A6NM62 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
LRRC53A6NM62 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LRRC53A6NM62 AL449106.1-201ENST00000608517 1980 ntBASIC26.97■■□□□ 1.91
LRRC53A6NM62 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC53A6NM62 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
LRRC53A6NM62 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.96■■□□□ 1.91
LRRC53A6NM62 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.96■■□□□ 1.91
LRRC53A6NM62 AC110285.7-201ENST00000624417 1536 ntBASIC26.95■■□□□ 1.91
LRRC53A6NM62 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
LRRC53A6NM62 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
LRRC53A6NM62 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
LRRC53A6NM62 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.95■■□□□ 1.9
LRRC53A6NM62 AC091060.1-201ENST00000623524 1766 ntBASIC26.94■■□□□ 1.9
LRRC53A6NM62 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.94■■□□□ 1.9
LRRC53A6NM62 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
LRRC53A6NM62 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRRC53A6NM62 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.94■■□□□ 1.9
LRRC53A6NM62 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.93■■□□□ 1.9
LRRC53A6NM62 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC53A6NM62 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.92■■□□□ 1.9
LRRC53A6NM62 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
LRRC53A6NM62 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.91■■□□□ 1.9
LRRC53A6NM62 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
LRRC53A6NM62 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.91■■□□□ 1.9
LRRC53A6NM62 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRRC53A6NM62 AC021231.2-201ENST00000594613 730 ntBASIC26.9■■□□□ 1.9
LRRC53A6NM62 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LRRC53A6NM62 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
LRRC53A6NM62 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.89■■□□□ 1.89
LRRC53A6NM62 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms