Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV8-6A0A0B4J262 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV8-6A0A0B4J262 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-6A0A0B4J262 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-6A0A0B4J262 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV8-6A0A0B4J262 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV8-6A0A0B4J262 AC005559.1-201ENST00000589661 871 ntBASIC18.19■□□□□ 0.5
TRAV8-6A0A0B4J262 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV8-6A0A0B4J262 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-6A0A0B4J262 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 AP006261.1-201ENST00000584783 668 ntBASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-6A0A0B4J262 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV8-6A0A0B4J262 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-6A0A0B4J262 AL135925.1-201ENST00000605920 1701 ntBASIC18.16■□□□□ 0.5
TRAV8-6A0A0B4J262 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-6A0A0B4J262 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-6A0A0B4J262 AL139393.2-201ENST00000608721 2025 ntBASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 MIR3665-201ENST00000578708 105 ntBASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-6A0A0B4J262 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV8-6A0A0B4J262 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
TRAV8-6A0A0B4J262 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-6A0A0B4J262 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV8-6A0A0B4J262 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-6A0A0B4J262 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV8-6A0A0B4J262 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-6A0A0B4J262 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-6A0A0B4J262 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV8-6A0A0B4J262 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV8-6A0A0B4J262 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-6A0A0B4J262 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-6A0A0B4J262 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-6A0A0B4J262 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV8-6A0A0B4J262 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV8-6A0A0B4J262 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-6A0A0B4J262 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV8-6A0A0B4J262 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAV8-6A0A0B4J262 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-6A0A0B4J262 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-6A0A0B4J262 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV8-6A0A0B4J262 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-6A0A0B4J262 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 AC010864.1-201ENST00000609407 1511 ntBASIC18.08■□□□□ 0.48
TRAV8-6A0A0B4J262 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-6A0A0B4J262 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-6A0A0B4J262 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV8-6A0A0B4J262 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV8-6A0A0B4J262 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRAV8-6A0A0B4J262 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV8-6A0A0B4J262 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-6A0A0B4J262 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-6A0A0B4J262 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-6A0A0B4J262 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV8-6A0A0B4J262 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-6A0A0B4J262 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms