Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV23-1A0A0A0MS06 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV23-1A0A0A0MS06 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.02■□□□□ 0.96
TRBV23-1A0A0A0MS06 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV23-1A0A0A0MS06 MIR3648-2-201ENST00000581792 180 ntBASIC21.01■□□□□ 0.95
TRBV23-1A0A0A0MS06 MIR3648-1-201ENST00000615959 180 ntBASIC21.01■□□□□ 0.95
TRBV23-1A0A0A0MS06 CR559946.2-201ENST00000623684 991 ntBASIC21.01■□□□□ 0.95
TRBV23-1A0A0A0MS06 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV23-1A0A0A0MS06 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 HES6-205ENST00000409356 528 ntTSL 2 BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
TRBV23-1A0A0A0MS06 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 AP002414.2-202ENST00000590929 1450 ntBASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV23-1A0A0A0MS06 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV23-1A0A0A0MS06 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV23-1A0A0A0MS06 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.96■□□□□ 0.95
TRBV23-1A0A0A0MS06 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV23-1A0A0A0MS06 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV23-1A0A0A0MS06 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV23-1A0A0A0MS06 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRBV23-1A0A0A0MS06 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBV23-1A0A0A0MS06 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV23-1A0A0A0MS06 AC008813.1-201ENST00000536597 885 ntBASIC20.95■□□□□ 0.94
TRBV23-1A0A0A0MS06 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 AC016575.1-201ENST00000607026 382 ntBASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV23-1A0A0A0MS06 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23-1A0A0A0MS06 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV23-1A0A0A0MS06 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV23-1A0A0A0MS06 DRD5P2-201ENST00000421395 2012 ntBASIC20.93■□□□□ 0.94
TRBV23-1A0A0A0MS06 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.92■□□□□ 0.94
TRBV23-1A0A0A0MS06 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23-1A0A0A0MS06 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV23-1A0A0A0MS06 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRBV23-1A0A0A0MS06 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV23-1A0A0A0MS06 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.89■□□□□ 0.94
TRBV23-1A0A0A0MS06 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV23-1A0A0A0MS06 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV23-1A0A0A0MS06 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV23-1A0A0A0MS06 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV23-1A0A0A0MS06 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV23-1A0A0A0MS06 MIR639-201ENST00000384974 98 ntBASIC20.88■□□□□ 0.93
TRBV23-1A0A0A0MS06 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV23-1A0A0A0MS06 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 HLA-V-202ENST00000446817 847 ntBASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV23-1A0A0A0MS06 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV23-1A0A0A0MS06 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRBV23-1A0A0A0MS06 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms