Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 AC012676.1-201ENST00000574705 1949 ntBASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV9-1A0A075B6T8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRAV9-1A0A075B6T8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV9-1A0A075B6T8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV9-1A0A075B6T8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRAV9-1A0A075B6T8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV9-1A0A075B6T8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV9-1A0A075B6T8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 AC092803.2-201ENST00000564287 1899 ntBASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV9-1A0A075B6T8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV9-1A0A075B6T8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TRAV9-1A0A075B6T8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV9-1A0A075B6T8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-1A0A075B6T8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-1A0A075B6T8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-1A0A075B6T8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-1A0A075B6T8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV9-1A0A075B6T8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV9-1A0A075B6T8 LINC00543-201ENST00000567234 1845 ntBASIC18.9■□□□□ 0.62
TRAV9-1A0A075B6T8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV9-1A0A075B6T8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV9-1A0A075B6T8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV9-1A0A075B6T8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV9-1A0A075B6T8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV9-1A0A075B6T8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRAV9-1A0A075B6T8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV9-1A0A075B6T8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV9-1A0A075B6T8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-1A0A075B6T8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TRAV9-1A0A075B6T8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-1A0A075B6T8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV9-1A0A075B6T8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV9-1A0A075B6T8 ERN1-208ENST00000606895 2068 ntBASIC18.86■□□□□ 0.61
TRAV9-1A0A075B6T8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV9-1A0A075B6T8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV9-1A0A075B6T8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV9-1A0A075B6T8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV9-1A0A075B6T8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.85■□□□□ 0.61
TRAV9-1A0A075B6T8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV9-1A0A075B6T8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV9-1A0A075B6T8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-1A0A075B6T8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV9-1A0A075B6T8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-1A0A075B6T8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-1A0A075B6T8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV9-1A0A075B6T8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV9-1A0A075B6T8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TRAV9-1A0A075B6T8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV9-1A0A075B6T8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRAV9-1A0A075B6T8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV9-1A0A075B6T8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV9-1A0A075B6T8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV9-1A0A075B6T8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV9-1A0A075B6T8 AP002414.2-202ENST00000590929 1450 ntBASIC18.82■□□□□ 0.6
TRAV9-1A0A075B6T8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAV9-1A0A075B6T8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV9-1A0A075B6T8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-1A0A075B6T8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-1A0A075B6T8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV9-1A0A075B6T8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRAV9-1A0A075B6T8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms