Protein–RNA interactions for Protein: A0A075B6S4

IGKV1D-17, Immunoglobulin kappa variable 1D-17, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-17A0A075B6S4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGKV1D-17A0A075B6S4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-17A0A075B6S4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.11■□□□□ 0.97
IGKV1D-17A0A075B6S4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.11■□□□□ 0.97
IGKV1D-17A0A075B6S4 CR559946.2-201ENST00000623684 991 ntBASIC21.11■□□□□ 0.97
IGKV1D-17A0A075B6S4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-17A0A075B6S4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
IGKV1D-17A0A075B6S4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
IGKV1D-17A0A075B6S4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IGKV1D-17A0A075B6S4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-17A0A075B6S4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-17A0A075B6S4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.08■□□□□ 0.97
IGKV1D-17A0A075B6S4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.08■□□□□ 0.97
IGKV1D-17A0A075B6S4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
IGKV1D-17A0A075B6S4 MIR3648-2-201ENST00000581792 180 ntBASIC21.07■□□□□ 0.96
IGKV1D-17A0A075B6S4 MIR3648-1-201ENST00000615959 180 ntBASIC21.07■□□□□ 0.96
IGKV1D-17A0A075B6S4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV1D-17A0A075B6S4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV1D-17A0A075B6S4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.06■□□□□ 0.96
IGKV1D-17A0A075B6S4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV1D-17A0A075B6S4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-17A0A075B6S4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
IGKV1D-17A0A075B6S4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.04■□□□□ 0.96
IGKV1D-17A0A075B6S4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-17A0A075B6S4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV1D-17A0A075B6S4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV1D-17A0A075B6S4 AC016575.1-201ENST00000607026 382 ntBASIC21.03■□□□□ 0.96
IGKV1D-17A0A075B6S4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGKV1D-17A0A075B6S4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
IGKV1D-17A0A075B6S4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGKV1D-17A0A075B6S4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGKV1D-17A0A075B6S4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.02■□□□□ 0.95
IGKV1D-17A0A075B6S4 AC008813.1-201ENST00000536597 885 ntBASIC21.01■□□□□ 0.95
IGKV1D-17A0A075B6S4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.01■□□□□ 0.95
IGKV1D-17A0A075B6S4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.01■□□□□ 0.95
IGKV1D-17A0A075B6S4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
IGKV1D-17A0A075B6S4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-17A0A075B6S4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-17A0A075B6S4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-17A0A075B6S4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-17A0A075B6S4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IGKV1D-17A0A075B6S4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-17A0A075B6S4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-17A0A075B6S4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
IGKV1D-17A0A075B6S4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGKV1D-17A0A075B6S4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 HLA-V-202ENST00000446817 847 ntBASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGKV1D-17A0A075B6S4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
IGKV1D-17A0A075B6S4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV1D-17A0A075B6S4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
IGKV1D-17A0A075B6S4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-17A0A075B6S4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IGKV1D-17A0A075B6S4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.95■□□□□ 0.94
IGKV1D-17A0A075B6S4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IGKV1D-17A0A075B6S4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV1D-17A0A075B6S4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
IGKV1D-17A0A075B6S4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.93■□□□□ 0.94
IGKV1D-17A0A075B6S4 AC148477.6-201ENST00000623746 465 ntBASIC20.93■□□□□ 0.94
IGKV1D-17A0A075B6S4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
IGKV1D-17A0A075B6S4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
IGKV1D-17A0A075B6S4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 MIR219A2-201ENST00000608502 1504 ntBASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.92■□□□□ 0.94
IGKV1D-17A0A075B6S4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms