RNA–Protein interactions for RNA: YDR543C

YDR543C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR543C, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR543CYDR543C YBR056W-AI2HB52 66 aa0.48□□□□□ -2.33
YDR543CYDR543C MDN1Q12019 4910 aaKnown RBP-0.15□□□□□ -2.43
YDR543CYDR543C FMP27Q06179 2628 aa-0.3□□□□□ -2.46
YDR543CYDR543C NSR1P27476 414 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
YDR543CYDR543C NUM1Q00402 2748 aa-0.36□□□□□ -2.47
YDR543CYDR543C PRP8P33334 2413 aaKnown RBP-0.36□□□□□ -2.47
YDR543CYDR543C TAO3P40468 2376 aa-0.41□□□□□ -2.47
YDR543CYDR543C GCN1P33892 2672 aaKnown RBP-0.43□□□□□ -2.48
YDR543CYDR543C TOR2P32600 2474 aaKnown RBP-0.46□□□□□ -2.48
YDR543CYDR543C YPR117WQ06116 2489 aa-0.46□□□□□ -2.48
YDR543CYDR543C TOR1P35169 2470 aa-0.52□□□□□ -2.49
YDR543CYDR543C CSF1Q12150 2958 aa-0.53□□□□□ -2.49
YDR543CYDR543C YDR344CQ05510 147 aa-0.53□□□□□ -2.49
YDR543CYDR543C DBP2P24783 546 aaKnown RBP-0.6□□□□□ -2.51
YDR543CYDR543C TEL1P38110 2787 aa-0.61□□□□□ -2.51
YDR543CYDR543C FAB1P34756 2278 aa-0.62□□□□□ -2.51
YDR543CYDR543C NPL3Q01560 414 aaKnown RBP RIP-Chip data-0.64□□□□□ -2.51not detected
YDR543CYDR543C SEA4P38164 1038 aa-0.65□□□□□ -2.51
YDR543CYDR543C RGA2Q06407 1009 aa-0.66□□□□□ -2.52
YDR543CYDR543C IRA2P19158 3079 aa-0.67□□□□□ -2.52
YDR543CYDR543C NOP1P15646 327 aaKnown RBP-0.68□□□□□ -2.52
YDR543CYDR543C SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.68□□□□□ -2.52not detected
YDR543CYDR543C UTP20P35194 2493 aaKnown RBP-0.69□□□□□ -2.52
YDR543CYDR543C SCJ1P25303 377 aa-0.75□□□□□ -2.53
YDR543CYDR543C MEC1P38111 2368 aa-0.75□□□□□ -2.53
YDR543CYDR543C SCD6P45978 349 aaKnown RBP RIP-Chip data-0.76□□□□□ -2.53not detected
YDR543CYDR543C YMR206WQ03695 313 aa-0.76□□□□□ -2.53
YDR543CYDR543C MPE1P35728 441 aaKnown RBP-0.8□□□□□ -2.54
YDR543CYDR543C SEC16P48415 2195 aaKnown RBP-0.8□□□□□ -2.54
YDR543CYDR543C ACC1Q00955 2233 aaKnown RBP-0.81□□□□□ -2.54
YDR543CYDR543C ILV3P39522 585 aaKnown RBP-0.82□□□□□ -2.54
YDR543CYDR543C LAS17Q12446 633 aa-0.82□□□□□ -2.54
YDR543CYDR543C DYN1P36022 4092 aa-0.85□□□□□ -2.55
YDR543CYDR543C VPS13Q07878 3144 aa-0.85□□□□□ -2.55
YDR543CYDR543C IRA1P18963 3092 aa-0.85□□□□□ -2.55
YDR543CYDR543C YEF3P16521 1044 aaKnown RBP-0.86□□□□□ -2.55
YDR543CYDR543C FAP1P53971 965 aa-0.86□□□□□ -2.55
YDR543CYDR543C SRC1Q03707 834 aa-0.86□□□□□ -2.55
YDR543CYDR543C CUP1-1P0CX80 61 aa-0.87□□□□□ -2.55
YDR543CYDR543C CUP1-2P0CX81 61 aa-0.87□□□□□ -2.55
YDR543CYDR543C TOM1Q03280 3268 aa-0.88□□□□□ -2.55
YDR543CYDR543C PEX2P32800 271 aa-0.89□□□□□ -2.55
YDR543CYDR543C SDH2P21801 266 aa-0.9□□□□□ -2.55
YDR543CYDR543C FKH1P40466 484 aa-0.9□□□□□ -2.55
YDR543CYDR543C AIR2Q12476 344 aaKnown RBP-0.92□□□□□ -2.56
YDR543CYDR543C ATS1P31386 333 aa-0.94□□□□□ -2.56
YDR543CYDR543C MOT2P34909 587 aaKnown RBP-0.96□□□□□ -2.56
YDR543CYDR543C CLA4P48562 842 aa-0.96□□□□□ -2.56
YDR543CYDR543C UBA4P38820 440 aa-0.97□□□□□ -2.56
YDR543CYDR543C IGO1P53897 168 aa-0.97□□□□□ -2.56
YDR543CYDR543C ITT1Q04638 464 aa-0.97□□□□□ -2.56
YDR543CYDR543C RPS29AP41057 56 aaKnown RBP-0.98□□□□□ -2.57
YDR543CYDR543C DED1P06634 604 aaKnown RBP-0.99□□□□□ -2.57
YDR543CYDR543C NAB2P32505 525 aaKnown RBP RIP-Chip data-0.99□□□□□ -2.57not detected
YDR543CYDR543C URA2P07259 2214 aaKnown RBP-1.01□□□□□ -2.57
YDR543CYDR543C YKR023WP36119 530 aaKnown RBP-1.01□□□□□ -2.57
YDR543CYDR543C KTR4P38131 464 aa-1.01□□□□□ -2.57
YDR543CYDR543C LSM4P40070 187 aaKnown RBP-1.01□□□□□ -2.57
YDR543CYDR543C TRA1P38811 3744 aa-1.03□□□□□ -2.57
YDR543CYDR543C DRE2P36152 348 aa-1.03□□□□□ -2.57
YDR543CYDR543C PSP2P50109 593 aaKnown RBP-1.03□□□□□ -2.57
YDR543CYDR543C RPS2P25443 254 aaKnown RBP-1.04□□□□□ -2.58
YDR543CYDR543C BOI2P39969 1040 aa-1.04□□□□□ -2.58
YDR543CYDR543C HFA1P32874 2273 aa-1.06□□□□□ -2.58
YDR543CYDR543C RRD1P40454 393 aaKnown RBP-1.07□□□□□ -2.58
YDR543CYDR543C CAF40P53829 373 aa-1.07□□□□□ -2.58
YDR543CYDR543C ABZ1P37254 787 aaPredicted RBP-1.08□□□□□ -2.58
YDR543CYDR543C DUO1P53168 247 aaKnown RBP-1.08□□□□□ -2.58
YDR543CYDR543C MTC4P38335 694 aaKnown RBP-1.09□□□□□ -2.58
YDR543CYDR543C TYW1Q08960 810 aaKnown RBP-1.1□□□□□ -2.59
YDR543CYDR543C TIF3P34167 436 aaKnown RBP-1.11□□□□□ -2.59
YDR543CYDR543C ASH1P34233 588 aa-1.11□□□□□ -2.59
YDR543CYDR543C YPR015CQ12531 247 aa-1.11□□□□□ -2.59
YDR543CYDR543C FRT1Q99332 602 aa-1.11□□□□□ -2.59
YDR543CYDR543C MBR1P23493 339 aa-1.12□□□□□ -2.59
YDR543CYDR543C UTR2P32623 467 aa-1.12□□□□□ -2.59
YDR543CYDR543C GLO2Q05584 274 aa-1.12□□□□□ -2.59
YDR543CYDR543C PSD2P53037 1138 aaKnown RBP-1.13□□□□□ -2.59
YDR543CYDR543C TFC6Q06339 672 aa-1.13□□□□□ -2.59
YDR543CYDR543C SBP1P10080 294 aaKnown RBP-1.14□□□□□ -2.59
YDR543CYDR543C SLX1P38324 304 aa-1.14□□□□□ -2.59
YDR543CYDR543C HST2P53686 357 aa-1.14□□□□□ -2.59
YDR543CYDR543C HEF3P53978 1044 aaKnown RBP-1.14□□□□□ -2.59
YDR543CYDR543C YLR278CQ05854 1341 aa-1.15□□□□□ -2.59
YDR543CYDR543C SEN1Q00416 2231 aaKnown RBP-1.15□□□□□ -2.59
YDR543CYDR543C SIS1P25294 352 aaKnown RBP-1.15□□□□□ -2.59
YDR543CYDR543C GAR1P28007 205 aaKnown RBP-1.15□□□□□ -2.59
YDR543CYDR543C ADP1P25371 1049 aa-1.16□□□□□ -2.6
YDR543CYDR543C ERF2Q06551 359 aa-1.16□□□□□ -2.6
YDR543CYDR543C SAL1D6W196 494 aa-1.17□□□□□ -2.6
YDR543CYDR543C HAP4P14064 554 aa-1.17□□□□□ -2.6
YDR543CYDR543C YJL068CP40363 299 aa-1.17□□□□□ -2.6
YDR543CYDR543C MAL13P53338 473 aa-1.17□□□□□ -2.6
YDR543CYDR543C AIM3P38266 947 aaKnown RBP-1.18□□□□□ -2.6
YDR543CYDR543C LSB3P43603 459 aaKnown RBP-1.18□□□□□ -2.6
YDR543CYDR543C YJL197C-AP0C5P0 93 aa-1.19□□□□□ -2.6
YDR543CYDR543C SEC23P15303 768 aaKnown RBP-1.19□□□□□ -2.6
YDR543CYDR543C RPS29BP41058 56 aaKnown RBP-1.19□□□□□ -2.6
YDR543CYDR543C RAM1P22007 431 aa-1.2□□□□□ -2.6
YDR543CYDR543C PKC1P24583 1151 aa-1.2□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms