RNA–Protein interactions for RNA: ENST00000641295.1

SAMMSON-212, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-212ENST00000641295 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
SAMMSON-212ENST00000641295 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
SAMMSON-212ENST00000641295 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
SAMMSON-212ENST00000641295 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
SAMMSON-212ENST00000641295 FOXD1Q16676 465 aa20.59■□□□□ 0.89
SAMMSON-212ENST00000641295 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
SAMMSON-212ENST00000641295 MSH5O43196 834 aa19.45■□□□□ 0.7
SAMMSON-212ENST00000641295 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
SAMMSON-212ENST00000641295 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
SAMMSON-212ENST00000641295 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SAMMSON-212ENST00000641295 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
SAMMSON-212ENST00000641295 ADRA2BP18089 450 aa18.93■□□□□ 0.62
SAMMSON-212ENST00000641295 ABCC9O60706 1549 aa18.07■□□□□ 0.48
SAMMSON-212ENST00000641295 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
SAMMSON-212ENST00000641295 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
SAMMSON-212ENST00000641295 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
SAMMSON-212ENST00000641295 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
SAMMSON-212ENST00000641295 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
SAMMSON-212ENST00000641295 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
SAMMSON-212ENST00000641295 KCNA4P22459 653 aa16.95■□□□□ 0.3
SAMMSON-212ENST00000641295 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
SAMMSON-212ENST00000641295 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SAMMSON-212ENST00000641295 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
SAMMSON-212ENST00000641295 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
SAMMSON-212ENST00000641295 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
SAMMSON-212ENST00000641295 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
SAMMSON-212ENST00000641295 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
SAMMSON-212ENST00000641295 NACADO15069 1562 aa16.66■□□□□ 0.26
SAMMSON-212ENST00000641295 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
SAMMSON-212ENST00000641295 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
SAMMSON-212ENST00000641295 NPM3O75607 178 aaKnown RBP16.54■□□□□ 0.24
SAMMSON-212ENST00000641295 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
SAMMSON-212ENST00000641295 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.23
SAMMSON-212ENST00000641295 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
SAMMSON-212ENST00000641295 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
SAMMSON-212ENST00000641295 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
SAMMSON-212ENST00000641295 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
SAMMSON-212ENST00000641295 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
SAMMSON-212ENST00000641295 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
SAMMSON-212ENST00000641295 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
SAMMSON-212ENST00000641295 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
SAMMSON-212ENST00000641295 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
SAMMSON-212ENST00000641295 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
SAMMSON-212ENST00000641295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
SAMMSON-212ENST00000641295 CUX2O14529 1486 aa15.86■□□□□ 0.13
SAMMSON-212ENST00000641295 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
SAMMSON-212ENST00000641295 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
SAMMSON-212ENST00000641295 DCAF1Q9Y4B6 1507 aa15.8■□□□□ 0.12
SAMMSON-212ENST00000641295 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
SAMMSON-212ENST00000641295 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SAMMSON-212ENST00000641295 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SAMMSON-212ENST00000641295 ZBTB22O15209 634 aa15.59■□□□□ 0.09
SAMMSON-212ENST00000641295 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
SAMMSON-212ENST00000641295 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
SAMMSON-212ENST00000641295 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
SAMMSON-212ENST00000641295 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
SAMMSON-212ENST00000641295 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
SAMMSON-212ENST00000641295 CAPN15O75808 1086 aa15.41■□□□□ 0.06
SAMMSON-212ENST00000641295 DSG3P32926 999 aa15.38■□□□□ 0.05
SAMMSON-212ENST00000641295 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
SAMMSON-212ENST00000641295 NESP48681 1621 aa15.35■□□□□ 0.05
SAMMSON-212ENST00000641295 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
SAMMSON-212ENST00000641295 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SAMMSON-212ENST00000641295 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.03
SAMMSON-212ENST00000641295 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
SAMMSON-212ENST00000641295 POTEHQ6S545 545 aa15.19■□□□□ 0.02
SAMMSON-212ENST00000641295 APLP2Q06481 763 aa15.18■□□□□ 0.02
SAMMSON-212ENST00000641295 SMARCA2P51531 1590 aa15.17■□□□□ 0.02
SAMMSON-212ENST00000641295 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
SAMMSON-212ENST00000641295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
SAMMSON-212ENST00000641295 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
SAMMSON-212ENST00000641295 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
SAMMSON-212ENST00000641295 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
SAMMSON-212ENST00000641295 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0.01
SAMMSON-212ENST00000641295 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0.01
SAMMSON-212ENST00000641295 SMARCA4P51532 1647 aa15.06■□□□□ 0
SAMMSON-212ENST00000641295 BAZ1BQ9UIG0 1483 aaKnown RBP15.06■□□□□ 0
SAMMSON-212ENST00000641295 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
SAMMSON-212ENST00000641295 OSCARQ8IYS5 282 aa15.05■□□□□ -0
SAMMSON-212ENST00000641295 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
SAMMSON-212ENST00000641295 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
SAMMSON-212ENST00000641295 ABCB7O75027 752 aa15□□□□□ -0.01
SAMMSON-212ENST00000641295 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
SAMMSON-212ENST00000641295 RTN4Q9NQC3 1192 aaKnown RBP14.97□□□□□ -0.01
SAMMSON-212ENST00000641295 WDR62O43379 1518 aa14.97□□□□□ -0.01
SAMMSON-212ENST00000641295 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
SAMMSON-212ENST00000641295 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
SAMMSON-212ENST00000641295 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
SAMMSON-212ENST00000641295 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
SAMMSON-212ENST00000641295 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
SAMMSON-212ENST00000641295 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
SAMMSON-212ENST00000641295 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
SAMMSON-212ENST00000641295 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
SAMMSON-212ENST00000641295 ARHGEF11O15085 1522 aa14.78□□□□□ -0.04
SAMMSON-212ENST00000641295 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.04
SAMMSON-212ENST00000641295 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
SAMMSON-212ENST00000641295 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
SAMMSON-212ENST00000641295 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
SAMMSON-212ENST00000641295 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
SAMMSON-212ENST00000641295 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms