RNA–Protein interactions for RNA: ENST00000639663.1

ME2-213, Transcript of malic enzyme 2, humanhuman

TSL 5

Gene ME2, Length 5,016 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME2-213ENST00000639663 NISCHQ9Y2I1 1504 aa17.91■□□□□ 0.46
ME2-213ENST00000639663 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
ME2-213ENST00000639663 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
ME2-213ENST00000639663 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
ME2-213ENST00000639663 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
ME2-213ENST00000639663 FAM9AQ8IZU1 332 aaPredicted RBP15.02□□□□□ -0.01
ME2-213ENST00000639663 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
ME2-213ENST00000639663 ABCC9O60706 1549 aa14.93□□□□□ -0.02
ME2-213ENST00000639663 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
ME2-213ENST00000639663 NACADO15069 1562 aa14.82□□□□□ -0.04
ME2-213ENST00000639663 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
ME2-213ENST00000639663 APLP2Q06481 763 aa14.68□□□□□ -0.06
ME2-213ENST00000639663 MYO15BQ96JP2 1530 aa14.64□□□□□ -0.07
ME2-213ENST00000639663 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
ME2-213ENST00000639663 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
ME2-213ENST00000639663 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
ME2-213ENST00000639663 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
ME2-213ENST00000639663 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
ME2-213ENST00000639663 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
ME2-213ENST00000639663 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
ME2-213ENST00000639663 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
ME2-213ENST00000639663 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
ME2-213ENST00000639663 EEA1Q15075 1411 aa13.97□□□□□ -0.17
ME2-213ENST00000639663 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
ME2-213ENST00000639663 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
ME2-213ENST00000639663 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
ME2-213ENST00000639663 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
ME2-213ENST00000639663 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
ME2-213ENST00000639663 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
ME2-213ENST00000639663 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
ME2-213ENST00000639663 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
ME2-213ENST00000639663 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
ME2-213ENST00000639663 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
ME2-213ENST00000639663 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
ME2-213ENST00000639663 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
ME2-213ENST00000639663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
ME2-213ENST00000639663 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
ME2-213ENST00000639663 WRNQ14191 1432 aaPredicted RBP eCLIP13.66□□□□□ -0.22
ME2-213ENST00000639663 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
ME2-213ENST00000639663 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
ME2-213ENST00000639663 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
ME2-213ENST00000639663 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
ME2-213ENST00000639663 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
ME2-213ENST00000639663 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
ME2-213ENST00000639663 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
ME2-213ENST00000639663 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
ME2-213ENST00000639663 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
ME2-213ENST00000639663 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
ME2-213ENST00000639663 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
ME2-213ENST00000639663 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
ME2-213ENST00000639663 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
ME2-213ENST00000639663 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
ME2-213ENST00000639663 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
ME2-213ENST00000639663 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
ME2-213ENST00000639663 CENPBP07199 599 aaPredicted RBP13.45□□□□□ -0.26
ME2-213ENST00000639663 FBLN2P98095 1184 aa13.44□□□□□ -0.26
ME2-213ENST00000639663 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
ME2-213ENST00000639663 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
ME2-213ENST00000639663 TNIKQ9UKE5 1360 aa13.42□□□□□ -0.26
ME2-213ENST00000639663 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
ME2-213ENST00000639663 WIZO95785 1651 aa13.4□□□□□ -0.26
ME2-213ENST00000639663 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
ME2-213ENST00000639663 CLIP1P30622 1438 aa13.37□□□□□ -0.27
ME2-213ENST00000639663 FHAD1B1AJZ9 1412 aa13.37□□□□□ -0.27
ME2-213ENST00000639663 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
ME2-213ENST00000639663 CUX2O14529 1486 aa13.28□□□□□ -0.28
ME2-213ENST00000639663 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
ME2-213ENST00000639663 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
ME2-213ENST00000639663 SOGA1O94964 1423 aa13.25□□□□□ -0.29
ME2-213ENST00000639663 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
ME2-213ENST00000639663 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
ME2-213ENST00000639663 ITGAEP38570 1179 aa13.24□□□□□ -0.29
ME2-213ENST00000639663 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
ME2-213ENST00000639663 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
ME2-213ENST00000639663 HRCP23327 699 aa13.23□□□□□ -0.29
ME2-213ENST00000639663 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
ME2-213ENST00000639663 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
ME2-213ENST00000639663 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
ME2-213ENST00000639663 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
ME2-213ENST00000639663 NEFLP07196 543 aa13.17□□□□□ -0.3
ME2-213ENST00000639663 PLEKHD1A6NEE1 506 aa13.16□□□□□ -0.3
ME2-213ENST00000639663 CFTRP13569 1480 aa13.15□□□□□ -0.3
ME2-213ENST00000639663 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
ME2-213ENST00000639663 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
ME2-213ENST00000639663 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
ME2-213ENST00000639663 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
ME2-213ENST00000639663 ESF1Q9H501 851 aaKnown RBP13.12□□□□□ -0.31
ME2-213ENST00000639663 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
ME2-213ENST00000639663 P3H3Q8IVL6 736 aa13.11□□□□□ -0.31
ME2-213ENST00000639663 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
ME2-213ENST00000639663 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
ME2-213ENST00000639663 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
ME2-213ENST00000639663 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
ME2-213ENST00000639663 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
ME2-213ENST00000639663 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
ME2-213ENST00000639663 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.32
ME2-213ENST00000639663 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
ME2-213ENST00000639663 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
ME2-213ENST00000639663 KIF21BO75037 1637 aa13□□□□□ -0.33
ME2-213ENST00000639663 TOP2BQ02880 1626 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms