RNA–Protein interactions for RNA: ENST00000638588.1

KCNQ3-206, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-206ENST00000638588 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
KCNQ3-206ENST00000638588 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
KCNQ3-206ENST00000638588 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
KCNQ3-206ENST00000638588 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
KCNQ3-206ENST00000638588 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
KCNQ3-206ENST00000638588 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
KCNQ3-206ENST00000638588 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
KCNQ3-206ENST00000638588 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
KCNQ3-206ENST00000638588 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
KCNQ3-206ENST00000638588 HRCP23327 699 aa20.66■□□□□ 0.9
KCNQ3-206ENST00000638588 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
KCNQ3-206ENST00000638588 ABCC9O60706 1549 aa20.17■□□□□ 0.82
KCNQ3-206ENST00000638588 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
KCNQ3-206ENST00000638588 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
KCNQ3-206ENST00000638588 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
KCNQ3-206ENST00000638588 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
KCNQ3-206ENST00000638588 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
KCNQ3-206ENST00000638588 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.76
KCNQ3-206ENST00000638588 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
KCNQ3-206ENST00000638588 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
KCNQ3-206ENST00000638588 NACADO15069 1562 aa19.6■□□□□ 0.73
KCNQ3-206ENST00000638588 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
KCNQ3-206ENST00000638588 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
KCNQ3-206ENST00000638588 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
KCNQ3-206ENST00000638588 WIZO95785 1651 aa19.43■□□□□ 0.7
KCNQ3-206ENST00000638588 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
KCNQ3-206ENST00000638588 EHMT2Q96KQ7 1210 aa19.38■□□□□ 0.69
KCNQ3-206ENST00000638588 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
KCNQ3-206ENST00000638588 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
KCNQ3-206ENST00000638588 TOP2AP11388 1531 aaKnown RBP19.17■□□□□ 0.66
KCNQ3-206ENST00000638588 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
KCNQ3-206ENST00000638588 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
KCNQ3-206ENST00000638588 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
KCNQ3-206ENST00000638588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
KCNQ3-206ENST00000638588 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
KCNQ3-206ENST00000638588 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
KCNQ3-206ENST00000638588 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
KCNQ3-206ENST00000638588 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
KCNQ3-206ENST00000638588 CEP162Q5TB80 1403 aa19.02■□□□□ 0.64
KCNQ3-206ENST00000638588 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
KCNQ3-206ENST00000638588 EEA1Q15075 1411 aa19■□□□□ 0.63
KCNQ3-206ENST00000638588 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
KCNQ3-206ENST00000638588 SOGA1O94964 1423 aa18.94■□□□□ 0.62
KCNQ3-206ENST00000638588 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
KCNQ3-206ENST00000638588 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
KCNQ3-206ENST00000638588 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.62
KCNQ3-206ENST00000638588 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
KCNQ3-206ENST00000638588 TTBK1Q5TCY1 1321 aaPredicted RBP18.85■□□□□ 0.61
KCNQ3-206ENST00000638588 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
KCNQ3-206ENST00000638588 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
KCNQ3-206ENST00000638588 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
KCNQ3-206ENST00000638588 RUSC2Q8N2Y8 1516 aa18.82■□□□□ 0.6
KCNQ3-206ENST00000638588 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
KCNQ3-206ENST00000638588 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
KCNQ3-206ENST00000638588 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
KCNQ3-206ENST00000638588 KIF21BO75037 1637 aa18.71■□□□□ 0.59
KCNQ3-206ENST00000638588 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
KCNQ3-206ENST00000638588 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
KCNQ3-206ENST00000638588 SYNJ1O43426 1573 aa18.64■□□□□ 0.57
KCNQ3-206ENST00000638588 CLIP1P30622 1438 aa18.62■□□□□ 0.57
KCNQ3-206ENST00000638588 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
KCNQ3-206ENST00000638588 VPS8Q8N3P4 1428 aa18.58■□□□□ 0.57
KCNQ3-206ENST00000638588 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
KCNQ3-206ENST00000638588 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
KCNQ3-206ENST00000638588 APLP2Q06481 763 aa18.51■□□□□ 0.55
KCNQ3-206ENST00000638588 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
KCNQ3-206ENST00000638588 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
KCNQ3-206ENST00000638588 MIER1Q8N108 512 aa18.43■□□□□ 0.54
KCNQ3-206ENST00000638588 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
KCNQ3-206ENST00000638588 YTHDC1Q96MU7 727 aaKnown RBP18.42■□□□□ 0.54
KCNQ3-206ENST00000638588 MYT1Q01538 1121 aa18.37■□□□□ 0.53
KCNQ3-206ENST00000638588 BIVM-ERCC5R4GMW8 1640 aa18.37■□□□□ 0.53
KCNQ3-206ENST00000638588 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
KCNQ3-206ENST00000638588 ERICH3Q5RHP9 1530 aa18.36■□□□□ 0.53
KCNQ3-206ENST00000638588 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
KCNQ3-206ENST00000638588 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
KCNQ3-206ENST00000638588 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
KCNQ3-206ENST00000638588 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
KCNQ3-206ENST00000638588 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
KCNQ3-206ENST00000638588 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
KCNQ3-206ENST00000638588 KANK4Q5T7N3 995 aaPredicted RBP18.17■□□□□ 0.5
KCNQ3-206ENST00000638588 CUX1P39880 1505 aa18.16■□□□□ 0.5
KCNQ3-206ENST00000638588 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
KCNQ3-206ENST00000638588 CUX2O14529 1486 aa18.15■□□□□ 0.5
KCNQ3-206ENST00000638588 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
KCNQ3-206ENST00000638588 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
KCNQ3-206ENST00000638588 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
KCNQ3-206ENST00000638588 CFTRP13569 1480 aa18.04■□□□□ 0.48
KCNQ3-206ENST00000638588 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
KCNQ3-206ENST00000638588 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
KCNQ3-206ENST00000638588 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
KCNQ3-206ENST00000638588 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
KCNQ3-206ENST00000638588 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
KCNQ3-206ENST00000638588 ITGAEP38570 1179 aa17.94■□□□□ 0.46
KCNQ3-206ENST00000638588 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
KCNQ3-206ENST00000638588 IGF1RP08069 1367 aa17.91■□□□□ 0.46
KCNQ3-206ENST00000638588 SETD5Q9C0A6 1442 aa17.9■□□□□ 0.46
KCNQ3-206ENST00000638588 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
KCNQ3-206ENST00000638588 CARMIL1Q5VZK9 1371 aa17.86■□□□□ 0.45
KCNQ3-206ENST00000638588 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms