RNA–Protein interactions for RNA: ENST00000637948.1

RYR3-229, Transcript of ryanodine receptor 3, humanhuman

TSL 5

Gene RYR3, Length 3,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYR3-229ENST00000637948 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
RYR3-229ENST00000637948 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.54
RYR3-229ENST00000637948 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
RYR3-229ENST00000637948 NISCHQ9Y2I1 1504 aa10.63□□□□□ -0.71
RYR3-229ENST00000637948 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
RYR3-229ENST00000637948 FOXD1Q16676 465 aa9.82□□□□□ -0.84
RYR3-229ENST00000637948 MSH5O43196 834 aa9.64□□□□□ -0.87
RYR3-229ENST00000637948 POTEDQ86YR6 584 aa9.59□□□□□ -0.87
RYR3-229ENST00000637948 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
RYR3-229ENST00000637948 CCDC180Q9P1Z9 1646 aa9.09□□□□□ -0.95
RYR3-229ENST00000637948 PIAS4Q8N2W9 510 aaPredicted RBP9.02□□□□□ -0.96
RYR3-229ENST00000637948 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.98
RYR3-229ENST00000637948 SHROOM4Q9ULL8 1493 aa8.93□□□□□ -0.98
RYR3-229ENST00000637948 DCAF8L2P0C7V8 631 aa8.82□□□□□ -1
RYR3-229ENST00000637948 PPP6R1Q9UPN7 881 aa8.75□□□□□ -1.01
RYR3-229ENST00000637948 DCAF1Q9Y4B6 1507 aa8.73□□□□□ -1.01
RYR3-229ENST00000637948 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
RYR3-229ENST00000637948 ADRA2BP18089 450 aa8.68□□□□□ -1.02
RYR3-229ENST00000637948 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
RYR3-229ENST00000637948 ABCC9O60706 1549 aa8.53□□□□□ -1.04
RYR3-229ENST00000637948 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
RYR3-229ENST00000637948 DMRT2Q9Y5R5 561 aa8.51□□□□□ -1.05
RYR3-229ENST00000637948 SCRIBQ14160 1630 aa8.48□□□□□ -1.05
RYR3-229ENST00000637948 NACADO15069 1562 aa8.44□□□□□ -1.06
RYR3-229ENST00000637948 SCAF1Q9H7N4 1312 aaKnown RBP8.43□□□□□ -1.06
RYR3-229ENST00000637948 MYT1Q01538 1121 aa8.42□□□□□ -1.06
RYR3-229ENST00000637948 DNAJC5BQ9UF47 199 aa8.4□□□□□ -1.06
RYR3-229ENST00000637948 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
RYR3-229ENST00000637948 HRCP23327 699 aa8.37□□□□□ -1.07
RYR3-229ENST00000637948 PCGF6Q9BYE7 350 aa8.37□□□□□ -1.07
RYR3-229ENST00000637948 PPARGC1BQ86YN6 1023 aaKnown RBP8.35□□□□□ -1.07
RYR3-229ENST00000637948 RB1CC1Q8TDY2 1594 aa8.32□□□□□ -1.08
RYR3-229ENST00000637948 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
RYR3-229ENST00000637948 MROH2BQ7Z745 1585 aa8.26□□□□□ -1.09
RYR3-229ENST00000637948 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
RYR3-229ENST00000637948 UNC13AQ9UPW8 1703 aa8.22□□□□□ -1.09
RYR3-229ENST00000637948 WIZO95785 1651 aa8.2□□□□□ -1.1
RYR3-229ENST00000637948 BAZ1AQ9NRL2 1556 aaPredicted RBP8.15□□□□□ -1.1
RYR3-229ENST00000637948 HOXD11P31277 338 aaPredicted RBP8.15□□□□□ -1.1
RYR3-229ENST00000637948 PABPN1Q86U42 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
RYR3-229ENST00000637948 BICRAQ9NZM4 1560 aa8.14□□□□□ -1.11
RYR3-229ENST00000637948 PRKCSHP14314 528 aaPredicted RBP8.13□□□□□ -1.11
RYR3-229ENST00000637948 TTBK1Q5TCY1 1321 aaPredicted RBP8.12□□□□□ -1.11
RYR3-229ENST00000637948 SMARCA4P51532 1647 aa8.12□□□□□ -1.11
RYR3-229ENST00000637948 TRIM41Q8WV44 630 aa8.11□□□□□ -1.11
RYR3-229ENST00000637948 CACNB1Q02641 598 aaPredicted RBP8.08□□□□□ -1.12
RYR3-229ENST00000637948 EHMT2Q96KQ7 1210 aa8.08□□□□□ -1.12
RYR3-229ENST00000637948 RNF39Q9H2S5 420 aa8.07□□□□□ -1.12
RYR3-229ENST00000637948 TOP2AP11388 1531 aaKnown RBP8.06□□□□□ -1.12
RYR3-229ENST00000637948 C1QBPQ07021 282 aaKnown RBP8.05□□□□□ -1.12
RYR3-229ENST00000637948 CCDC88BA6NC98 1476 aa8.04□□□□□ -1.12
RYR3-229ENST00000637948 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
RYR3-229ENST00000637948 EIF4G1Q04637 1599 aaKnown RBP8.04□□□□□ -1.12
RYR3-229ENST00000637948 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
RYR3-229ENST00000637948 SMARCA2P51531 1590 aa8.03□□□□□ -1.12
RYR3-229ENST00000637948 MAPK8IP2Q13387 824 aaPredicted RBP8□□□□□ -1.13
RYR3-229ENST00000637948 RNF216Q9NWF9 866 aaPredicted RBP7.99□□□□□ -1.13
RYR3-229ENST00000637948 PEG3Q9GZU2 1588 aa7.98□□□□□ -1.13
RYR3-229ENST00000637948 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
RYR3-229ENST00000637948 ABCC8Q09428 1581 aa7.96□□□□□ -1.14
RYR3-229ENST00000637948 ATAD2BQ9ULI0 1458 aa7.95□□□□□ -1.14
RYR3-229ENST00000637948 CNKSR2Q8WXI2 1034 aa7.93□□□□□ -1.14
RYR3-229ENST00000637948 BAZ1BQ9UIG0 1483 aaKnown RBP7.9□□□□□ -1.15
RYR3-229ENST00000637948 APLP2Q06481 763 aa7.88□□□□□ -1.15
RYR3-229ENST00000637948 SOGA1O94964 1423 aa7.87□□□□□ -1.15
RYR3-229ENST00000637948 ERICH6Q7L0X2 663 aa7.86□□□□□ -1.15
RYR3-229ENST00000637948 RUSC2Q8N2Y8 1516 aa7.85□□□□□ -1.15
RYR3-229ENST00000637948 WRNQ14191 1432 aaPredicted RBP eCLIP7.84□□□□□ -1.15
RYR3-229ENST00000637948 ZEB1P37275 1124 aaPredicted RBP7.83□□□□□ -1.16
RYR3-229ENST00000637948 NCAPD3P42695 1498 aa7.83□□□□□ -1.16
RYR3-229ENST00000637948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.83□□□□□ -1.16
RYR3-229ENST00000637948 PPP4R3CPQ6ZMV5 832 aa7.82□□□□□ -1.16
RYR3-229ENST00000637948 BCL11AQ9H165 835 aa7.82□□□□□ -1.16
RYR3-229ENST00000637948 CSRNP3Q8WYN3 585 aa7.81□□□□□ -1.16
RYR3-229ENST00000637948 SYNJ1O43426 1573 aa7.81□□□□□ -1.16
RYR3-229ENST00000637948 HMGXB3Q12766 1538 aa7.79□□□□□ -1.16
RYR3-229ENST00000637948 EEA1Q15075 1411 aa7.78□□□□□ -1.16
RYR3-229ENST00000637948 TNIKQ9UKE5 1360 aa7.76□□□□□ -1.17
RYR3-229ENST00000637948 CCER1Q8TC90 406 aaPredicted RBP7.75□□□□□ -1.17
RYR3-229ENST00000637948 DNAJC5Q9H3Z4 198 aa7.75□□□□□ -1.17
RYR3-229ENST00000637948 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
RYR3-229ENST00000637948 UBTFP17480 764 aaKnown RBP7.74□□□□□ -1.17
RYR3-229ENST00000637948 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
RYR3-229ENST00000637948 TOP2BQ02880 1626 aa7.73□□□□□ -1.17
RYR3-229ENST00000637948 CFTRP13569 1480 aa7.72□□□□□ -1.17
RYR3-229ENST00000637948 GOLGA3Q08378 1498 aa7.72□□□□□ -1.17
RYR3-229ENST00000637948 BIVM-ERCC5R4GMW8 1640 aa7.71□□□□□ -1.18
RYR3-229ENST00000637948 CUX1P39880 1505 aa7.7□□□□□ -1.18
RYR3-229ENST00000637948 CEP164Q9UPV0 1460 aa7.69□□□□□ -1.18
RYR3-229ENST00000637948 KIF21BO75037 1637 aa7.69□□□□□ -1.18
RYR3-229ENST00000637948 CC2D2AQ9P2K1 1620 aa7.69□□□□□ -1.18
RYR3-229ENST00000637948 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
RYR3-229ENST00000637948 RAPGEF2Q9Y4G8 1499 aa7.67□□□□□ -1.18
RYR3-229ENST00000637948 DIEXFQ68CQ4 756 aaKnown RBP7.66□□□□□ -1.18
RYR3-229ENST00000637948 CADPSQ9ULU8 1353 aa7.66□□□□□ -1.18
RYR3-229ENST00000637948 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
RYR3-229ENST00000637948 NCBP3Q53F19 620 aaKnown RBP7.65□□□□□ -1.18
RYR3-229ENST00000637948 PRDM2Q13029 1718 aa7.63□□□□□ -1.19
RYR3-229ENST00000637948 PRXQ9BXM0 1461 aa7.63□□□□□ -1.19
RYR3-229ENST00000637948 CLIP1P30622 1438 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms