RNA–Protein interactions for RNA: ENST00000637788.1

ARID1A-217, Transcript of AT-rich interaction domain 1A, humanhuman

Gene ARID1A, Length 3,046 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-217ENST00000637788 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
ARID1A-217ENST00000637788 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
ARID1A-217ENST00000637788 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
ARID1A-217ENST00000637788 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
ARID1A-217ENST00000637788 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
ARID1A-217ENST00000637788 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
ARID1A-217ENST00000637788 HRCP23327 699 aa17.53■□□□□ 0.4
ARID1A-217ENST00000637788 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
ARID1A-217ENST00000637788 MYT1Q01538 1121 aa17.16■□□□□ 0.34
ARID1A-217ENST00000637788 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
ARID1A-217ENST00000637788 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
ARID1A-217ENST00000637788 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
ARID1A-217ENST00000637788 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
ARID1A-217ENST00000637788 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
ARID1A-217ENST00000637788 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
ARID1A-217ENST00000637788 ABCC9O60706 1549 aa16.65■□□□□ 0.26
ARID1A-217ENST00000637788 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
ARID1A-217ENST00000637788 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
ARID1A-217ENST00000637788 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
ARID1A-217ENST00000637788 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
ARID1A-217ENST00000637788 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
ARID1A-217ENST00000637788 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
ARID1A-217ENST00000637788 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
ARID1A-217ENST00000637788 TTBK1Q5TCY1 1321 aaPredicted RBP16.27■□□□□ 0.2
ARID1A-217ENST00000637788 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
ARID1A-217ENST00000637788 NACADO15069 1562 aa16.26■□□□□ 0.19
ARID1A-217ENST00000637788 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
ARID1A-217ENST00000637788 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
ARID1A-217ENST00000637788 MROH2BQ7Z745 1585 aa16.18■□□□□ 0.18
ARID1A-217ENST00000637788 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
ARID1A-217ENST00000637788 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
ARID1A-217ENST00000637788 WIZO95785 1651 aa16.1■□□□□ 0.17
ARID1A-217ENST00000637788 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.17
ARID1A-217ENST00000637788 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
ARID1A-217ENST00000637788 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
ARID1A-217ENST00000637788 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
ARID1A-217ENST00000637788 EIF4G1Q04637 1599 aaKnown RBP15.85■□□□□ 0.13
ARID1A-217ENST00000637788 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
ARID1A-217ENST00000637788 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
ARID1A-217ENST00000637788 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
ARID1A-217ENST00000637788 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
ARID1A-217ENST00000637788 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
ARID1A-217ENST00000637788 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.12
ARID1A-217ENST00000637788 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
ARID1A-217ENST00000637788 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
ARID1A-217ENST00000637788 SOGA1O94964 1423 aa15.65■□□□□ 0.1
ARID1A-217ENST00000637788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
ARID1A-217ENST00000637788 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
ARID1A-217ENST00000637788 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.09
ARID1A-217ENST00000637788 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
ARID1A-217ENST00000637788 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.08
ARID1A-217ENST00000637788 CCER1Q8TC90 406 aaPredicted RBP15.55■□□□□ 0.08
ARID1A-217ENST00000637788 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
ARID1A-217ENST00000637788 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
ARID1A-217ENST00000637788 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
ARID1A-217ENST00000637788 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
ARID1A-217ENST00000637788 EEA1Q15075 1411 aa15.48■□□□□ 0.07
ARID1A-217ENST00000637788 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
ARID1A-217ENST00000637788 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
ARID1A-217ENST00000637788 GOLGA3Q08378 1498 aa15.43■□□□□ 0.06
ARID1A-217ENST00000637788 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
ARID1A-217ENST00000637788 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
ARID1A-217ENST00000637788 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
ARID1A-217ENST00000637788 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
ARID1A-217ENST00000637788 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
ARID1A-217ENST00000637788 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
ARID1A-217ENST00000637788 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
ARID1A-217ENST00000637788 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
ARID1A-217ENST00000637788 TSHZ2Q9NRE2 1034 aa15.3■□□□□ 0.04
ARID1A-217ENST00000637788 CLIP1P30622 1438 aa15.28■□□□□ 0.04
ARID1A-217ENST00000637788 KIF21BO75037 1637 aa15.28■□□□□ 0.04
ARID1A-217ENST00000637788 ERICH6Q7L0X2 663 aa15.27■□□□□ 0.04
ARID1A-217ENST00000637788 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
ARID1A-217ENST00000637788 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
ARID1A-217ENST00000637788 MIER1Q8N108 512 aa15.25■□□□□ 0.03
ARID1A-217ENST00000637788 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
ARID1A-217ENST00000637788 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
ARID1A-217ENST00000637788 APLP2Q06481 763 aa15.18■□□□□ 0.02
ARID1A-217ENST00000637788 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
ARID1A-217ENST00000637788 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
ARID1A-217ENST00000637788 NCAPD3P42695 1498 aa15.07■□□□□ 0
ARID1A-217ENST00000637788 PRXQ9BXM0 1461 aa15.06■□□□□ 0
ARID1A-217ENST00000637788 CUX1P39880 1505 aa15.05■□□□□ 0
ARID1A-217ENST00000637788 HMGXB3Q12766 1538 aa15.05■□□□□ 0
ARID1A-217ENST00000637788 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
ARID1A-217ENST00000637788 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
ARID1A-217ENST00000637788 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
ARID1A-217ENST00000637788 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
ARID1A-217ENST00000637788 CFTRP13569 1480 aa14.98□□□□□ -0.01
ARID1A-217ENST00000637788 RBM19Q9Y4C8 960 aaKnown RBP14.9□□□□□ -0.02
ARID1A-217ENST00000637788 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
ARID1A-217ENST00000637788 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
ARID1A-217ENST00000637788 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
ARID1A-217ENST00000637788 CUX2O14529 1486 aa14.87□□□□□ -0.03
ARID1A-217ENST00000637788 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
ARID1A-217ENST00000637788 ITGAEP38570 1179 aa14.85□□□□□ -0.03
ARID1A-217ENST00000637788 MYT1LQ9UL68 1186 aa14.85□□□□□ -0.03
ARID1A-217ENST00000637788 IGF1RP08069 1367 aa14.84□□□□□ -0.03
ARID1A-217ENST00000637788 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
ARID1A-217ENST00000637788 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms