RNA–Protein interactions for RNA: ENST00000637694.1

CNTNAP2-222, Transcript of contactin associated protein like 2, human

TSL 5

Gene CNTNAP2, Length 2,213 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP2-222	ENST00000637694	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.5	■□□□□ 0.23
CNTNAP2-222	ENST00000637694	NISCH	Q9Y2I1	1504 aa		15.65	■□□□□ 0.1
CNTNAP2-222	ENST00000637694	CHIC1	Q5VXU3	224 aa		15.53	■□□□□ 0.08
CNTNAP2-222	ENST00000637694	PELP1	Q8IZL8	1130 aa	Known RBP	15.18	■□□□□ 0.02
CNTNAP2-222	ENST00000637694	HRC	P23327	699 aa		15.03	■□□□□ -0
CNTNAP2-222	ENST00000637694	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.72	□□□□□ -0.05
CNTNAP2-222	ENST00000637694	MYT1	Q01538	1121 aa		14.7	□□□□□ -0.06
CNTNAP2-222	ENST00000637694	SCAF1	Q9H7N4	1312 aa	Known RBP	14.52	□□□□□ -0.09
CNTNAP2-222	ENST00000637694	PCGF6	Q9BYE7	350 aa		14.45	□□□□□ -0.1
CNTNAP2-222	ENST00000637694	SENP3	Q9H4L4	574 aa	Predicted RBP	14.25	□□□□□ -0.13
CNTNAP2-222	ENST00000637694	MYO15B	Q96JP2	1530 aa		14.22	□□□□□ -0.13
CNTNAP2-222	ENST00000637694	ABCC9	O60706	1549 aa		14.14	□□□□□ -0.15
CNTNAP2-222	ENST00000637694	CCDC180	Q9P1Z9	1646 aa		14.01	□□□□□ -0.17
CNTNAP2-222	ENST00000637694	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.97	□□□□□ -0.17
CNTNAP2-222	ENST00000637694	ACIN1	Q9UKV3	1341 aa	Known RBP	13.97	□□□□□ -0.17
CNTNAP2-222	ENST00000637694	PHF23	Q9BUL5	403 aa	Predicted RBP	13.96	□□□□□ -0.17
CNTNAP2-222	ENST00000637694	NEUROD1	Q13562	356 aa		13.93	□□□□□ -0.18
CNTNAP2-222	ENST00000637694	DCAF1	Q9Y4B6	1507 aa		13.92	□□□□□ -0.18
CNTNAP2-222	ENST00000637694	SUPT5H	O00267	1087 aa	Known RBP	13.87	□□□□□ -0.19
CNTNAP2-222	ENST00000637694	GTF3C3	Q9Y5Q9	886 aa		13.87	□□□□□ -0.19
CNTNAP2-222	ENST00000637694	ZEB1	P37275	1124 aa	Predicted RBP	13.86	□□□□□ -0.19
CNTNAP2-222	ENST00000637694	TRIM26	Q12899	539 aa	Predicted RBP	13.84	□□□□□ -0.19
CNTNAP2-222	ENST00000637694	BCL11A	Q9H165	835 aa		13.78	□□□□□ -0.2
CNTNAP2-222	ENST00000637694	SHROOM4	Q9ULL8	1493 aa		13.74	□□□□□ -0.21
CNTNAP2-222	ENST00000637694	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.69	□□□□□ -0.22
CNTNAP2-222	ENST00000637694	CENPB	P07199	599 aa	Predicted RBP	13.67	□□□□□ -0.22
CNTNAP2-222	ENST00000637694	PRKCSH	P14314	528 aa	Predicted RBP	13.63	□□□□□ -0.23
CNTNAP2-222	ENST00000637694	LOC105371045	A0A1W2PR82	267 aa		13.61	□□□□□ -0.23
CNTNAP2-222	ENST00000637694	ANP32E	Q9BTT0	268 aa		13.44	□□□□□ -0.26
CNTNAP2-222	ENST00000637694	DIEXF	Q68CQ4	756 aa	Known RBP	13.44	□□□□□ -0.26
CNTNAP2-222	ENST00000637694	CSRNP3	Q8WYN3	585 aa		13.34	□□□□□ -0.27
CNTNAP2-222	ENST00000637694	RB1CC1	Q8TDY2	1594 aa		13.34	□□□□□ -0.27
CNTNAP2-222	ENST00000637694	DCAF8L2	P0C7V8	631 aa		13.31	□□□□□ -0.28
CNTNAP2-222	ENST00000637694	DNAJC5B	Q9UF47	199 aa		13.31	□□□□□ -0.28
CNTNAP2-222	ENST00000637694	FOXD1	Q16676	465 aa		13.28	□□□□□ -0.28
CNTNAP2-222	ENST00000637694	YTHDC1	Q96MU7	727 aa	Known RBP	13.26	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	TRIM41	Q8WV44	630 aa		13.22	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.21	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	ERICH6	Q7L0X2	663 aa		13.21	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	NACAD	O15069	1562 aa		13.21	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	UNC13A	Q9UPW8	1703 aa		13.21	□□□□□ -0.29
CNTNAP2-222	ENST00000637694	TSHZ2	Q9NRE2	1034 aa		13.19	□□□□□ -0.3
CNTNAP2-222	ENST00000637694	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
CNTNAP2-222	ENST00000637694	APLP2	Q06481	763 aa		13.18	□□□□□ -0.3
CNTNAP2-222	ENST00000637694	CCER1	Q8TC90	406 aa	Predicted RBP	13.16	□□□□□ -0.3
CNTNAP2-222	ENST00000637694	POTED	Q86YR6	584 aa		13.13	□□□□□ -0.31
CNTNAP2-222	ENST00000637694	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.11	□□□□□ -0.31
CNTNAP2-222	ENST00000637694	MIER1	Q8N108	512 aa		13.08	□□□□□ -0.32
CNTNAP2-222	ENST00000637694	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.05	□□□□□ -0.32
CNTNAP2-222	ENST00000637694	BICRA	Q9NZM4	1560 aa		13.04	□□□□□ -0.32
CNTNAP2-222	ENST00000637694	CLSPN	Q9HAW4	1339 aa		13	□□□□□ -0.33
CNTNAP2-222	ENST00000637694	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.97	□□□□□ -0.33
CNTNAP2-222	ENST00000637694	SCRIB	Q14160	1630 aa		12.9	□□□□□ -0.34
CNTNAP2-222	ENST00000637694	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.89	□□□□□ -0.35
CNTNAP2-222	ENST00000637694	RBM19	Q9Y4C8	960 aa	Known RBP	12.82	□□□□□ -0.36
CNTNAP2-222	ENST00000637694	MSH5	O43196	834 aa		12.8	□□□□□ -0.36
CNTNAP2-222	ENST00000637694	EHMT2	Q96KQ7	1210 aa		12.79	□□□□□ -0.36
CNTNAP2-222	ENST00000637694	CC2D2A	Q9P2K1	1620 aa		12.75	□□□□□ -0.37
CNTNAP2-222	ENST00000637694	BCAN	Q96GW7	911 aa		12.72	□□□□□ -0.37
CNTNAP2-222	ENST00000637694	SALL2	Q9Y467	1007 aa	Predicted RBP	12.69	□□□□□ -0.38
CNTNAP2-222	ENST00000637694	EIF4G1	Q04637	1599 aa	Known RBP	12.69	□□□□□ -0.38
CNTNAP2-222	ENST00000637694	CECR2	Q9BXF3	1484 aa		12.67	□□□□□ -0.38
CNTNAP2-222	ENST00000637694	DEK	P35659	375 aa	Known RBP	12.66	□□□□□ -0.38
CNTNAP2-222	ENST00000637694	UBE2Q2	Q8WVN8	375 aa		12.65	□□□□□ -0.38
CNTNAP2-222	ENST00000637694	FKBP8	Q14318	412 aa		12.61	□□□□□ -0.39
CNTNAP2-222	ENST00000637694	CCDC136	Q96JN2	1154 aa		12.61	□□□□□ -0.39
CNTNAP2-222	ENST00000637694	MYT1L	Q9UL68	1186 aa		12.61	□□□□□ -0.39
CNTNAP2-222	ENST00000637694	FANCI	Q9NVI1	1328 aa		12.59	□□□□□ -0.39
CNTNAP2-222	ENST00000637694	ERICH6B	Q5W0A0	696 aa		12.56	□□□□□ -0.4
CNTNAP2-222	ENST00000637694	ITGAE	P38570	1179 aa		12.54	□□□□□ -0.4
CNTNAP2-222	ENST00000637694	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.52	□□□□□ -0.41
CNTNAP2-222	ENST00000637694	KCNH8	Q96L42	1107 aa		12.5	□□□□□ -0.41
CNTNAP2-222	ENST00000637694	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.45	□□□□□ -0.42
CNTNAP2-222	ENST00000637694	IL27	Q8NEV9	243 aa		12.42	□□□□□ -0.42
CNTNAP2-222	ENST00000637694	NEFL	P07196	543 aa		12.41	□□□□□ -0.42
CNTNAP2-222	ENST00000637694	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.38	□□□□□ -0.43
CNTNAP2-222	ENST00000637694	RTN4	Q9NQC3	1192 aa	Known RBP	12.37	□□□□□ -0.43
CNTNAP2-222	ENST00000637694	EIF5B	O60841	1220 aa	Known RBP	12.37	□□□□□ -0.43
CNTNAP2-222	ENST00000637694	NBR1	Q14596	966 aa		12.36	□□□□□ -0.43
CNTNAP2-222	ENST00000637694	RSF1	Q96T23	1441 aa	Predicted RBP	12.34	□□□□□ -0.43
CNTNAP2-222	ENST00000637694	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.33	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	CEP162	Q5TB80	1403 aa		12.33	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	PKNOX2	Q96KN3	472 aa		12.32	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.31	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	PAK3	O75914	559 aa	Predicted RBP	12.29	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	NOP58	Q9Y2X3	529 aa	Known RBP	12.29	□□□□□ -0.44
CNTNAP2-222	ENST00000637694	SMARCA4	P51532	1647 aa		12.24	□□□□□ -0.45
CNTNAP2-222	ENST00000637694	TRIM52	Q96A61	297 aa		12.24	□□□□□ -0.45
CNTNAP2-222	ENST00000637694	ATAD2B	Q9ULI0	1458 aa		12.22	□□□□□ -0.45
CNTNAP2-222	ENST00000637694	DHX57	Q6P158	1386 aa	Known RBP	12.22	□□□□□ -0.45
CNTNAP2-222	ENST00000637694	NCAPD3	P42695	1498 aa		12.21	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	PLEKHG5	O94827	1062 aa		12.19	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	TNIK	Q9UKE5	1360 aa		12.19	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	IRX6	P78412	446 aa	Predicted RBP	12.18	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	RTL5	Q5HYW3	569 aa	Predicted RBP	12.18	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	NES	P48681	1621 aa		12.18	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	SLC24A1	O60721	1099 aa		12.17	□□□□□ -0.46
CNTNAP2-222	ENST00000637694	WASHC2A	Q641Q2	1341 aa		12.14	□□□□□ -0.47
CNTNAP2-222	ENST00000637694	SMARCA2	P51531	1590 aa		12.14	□□□□□ -0.47
CNTNAP2-222	ENST00000637694	C11orf95	C9JLR9	678 aa	Predicted RBP	12.14	□□□□□ -0.47

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