RNA–Protein interactions for RNA: ENST00000637453.1

DCX-210, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DCX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-210ENST00000637453 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
DCX-210ENST00000637453 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
DCX-210ENST00000637453 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
DCX-210ENST00000637453 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
DCX-210ENST00000637453 CCDC180Q9P1Z9 1646 aa17.19■□□□□ 0.34
DCX-210ENST00000637453 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
DCX-210ENST00000637453 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
DCX-210ENST00000637453 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
DCX-210ENST00000637453 HRCP23327 699 aa16.7■□□□□ 0.26
DCX-210ENST00000637453 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
DCX-210ENST00000637453 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
DCX-210ENST00000637453 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
DCX-210ENST00000637453 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
DCX-210ENST00000637453 ABCC9O60706 1549 aa16.31■□□□□ 0.2
DCX-210ENST00000637453 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
DCX-210ENST00000637453 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
DCX-210ENST00000637453 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
DCX-210ENST00000637453 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
DCX-210ENST00000637453 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
DCX-210ENST00000637453 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
DCX-210ENST00000637453 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
DCX-210ENST00000637453 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
DCX-210ENST00000637453 NACADO15069 1562 aa15.84■□□□□ 0.13
DCX-210ENST00000637453 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
DCX-210ENST00000637453 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
DCX-210ENST00000637453 WIZO95785 1651 aa15.77■□□□□ 0.11
DCX-210ENST00000637453 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
DCX-210ENST00000637453 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
DCX-210ENST00000637453 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.07
DCX-210ENST00000637453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
DCX-210ENST00000637453 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
DCX-210ENST00000637453 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
DCX-210ENST00000637453 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
DCX-210ENST00000637453 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
DCX-210ENST00000637453 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
DCX-210ENST00000637453 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
DCX-210ENST00000637453 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
DCX-210ENST00000637453 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
DCX-210ENST00000637453 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
DCX-210ENST00000637453 SOGA1O94964 1423 aa15.37■□□□□ 0.05
DCX-210ENST00000637453 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
DCX-210ENST00000637453 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
DCX-210ENST00000637453 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.04
DCX-210ENST00000637453 EEA1Q15075 1411 aa15.31■□□□□ 0.04
DCX-210ENST00000637453 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
DCX-210ENST00000637453 ACIN1Q9UKV3 1341 aaKnown RBP15.3■□□□□ 0.04
DCX-210ENST00000637453 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
DCX-210ENST00000637453 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
DCX-210ENST00000637453 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
DCX-210ENST00000637453 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
DCX-210ENST00000637453 GOLGA3Q08378 1498 aa15.22■□□□□ 0.03
DCX-210ENST00000637453 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
DCX-210ENST00000637453 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
DCX-210ENST00000637453 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
DCX-210ENST00000637453 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
DCX-210ENST00000637453 GTF3C3Q9Y5Q9 886 aa15.12■□□□□ 0.01
DCX-210ENST00000637453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
DCX-210ENST00000637453 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
DCX-210ENST00000637453 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
DCX-210ENST00000637453 KIF21BO75037 1637 aa15.11■□□□□ 0.01
DCX-210ENST00000637453 CLIP1P30622 1438 aa15.06■□□□□ 0
DCX-210ENST00000637453 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
DCX-210ENST00000637453 VPS8Q8N3P4 1428 aa15.02□□□□□ -0.01
DCX-210ENST00000637453 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
DCX-210ENST00000637453 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
DCX-210ENST00000637453 RAPGEF2Q9Y4G8 1499 aa14.98□□□□□ -0.01
DCX-210ENST00000637453 APLP2Q06481 763 aa14.94□□□□□ -0.02
DCX-210ENST00000637453 MIER1Q8N108 512 aa14.94□□□□□ -0.02
DCX-210ENST00000637453 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
DCX-210ENST00000637453 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
DCX-210ENST00000637453 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
DCX-210ENST00000637453 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
DCX-210ENST00000637453 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
DCX-210ENST00000637453 PRXQ9BXM0 1461 aa14.81□□□□□ -0.04
DCX-210ENST00000637453 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
DCX-210ENST00000637453 CLSPNQ9HAW4 1339 aa14.79□□□□□ -0.04
DCX-210ENST00000637453 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
DCX-210ENST00000637453 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
DCX-210ENST00000637453 CUX1P39880 1505 aa14.72□□□□□ -0.05
DCX-210ENST00000637453 RRBP1Q9P2E9 1410 aaKnown RBP14.71□□□□□ -0.06
DCX-210ENST00000637453 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
DCX-210ENST00000637453 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
DCX-210ENST00000637453 MYT1Q01538 1121 aa14.67□□□□□ -0.06
DCX-210ENST00000637453 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
DCX-210ENST00000637453 CUX2O14529 1486 aa14.65□□□□□ -0.06
DCX-210ENST00000637453 ARHGAP35Q9NRY4 1499 aa14.64□□□□□ -0.07
DCX-210ENST00000637453 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
DCX-210ENST00000637453 CFTRP13569 1480 aa14.61□□□□□ -0.07
DCX-210ENST00000637453 ITGAEP38570 1179 aa14.55□□□□□ -0.08
DCX-210ENST00000637453 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
DCX-210ENST00000637453 SUPT16HQ9Y5B9 1047 aaKnown RBP14.53□□□□□ -0.08
DCX-210ENST00000637453 IGF1RP08069 1367 aa14.53□□□□□ -0.08
DCX-210ENST00000637453 RAB3GAP2Q9H2M9 1393 aa14.53□□□□□ -0.08
DCX-210ENST00000637453 MAP3K1Q13233 1512 aa14.52□□□□□ -0.09
DCX-210ENST00000637453 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
DCX-210ENST00000637453 MAPKBP1O60336 1514 aa14.51□□□□□ -0.09
DCX-210ENST00000637453 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
DCX-210ENST00000637453 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
DCX-210ENST00000637453 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
DCX-210ENST00000637453 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms