RNA–Protein interactions for RNA: ENST00000637121.1

EFHC1-228, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 2,786 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-228ENST00000637121 AEBP2Q6ZN18 517 aaPredicted RBP11.46□□□□□ -0.57
EFHC1-228ENST00000637121 CHIC1Q5VXU3 224 aa11.05□□□□□ -0.64
EFHC1-228ENST00000637121 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
EFHC1-228ENST00000637121 PHF23Q9BUL5 403 aaPredicted RBP9.75□□□□□ -0.85
EFHC1-228ENST00000637121 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
EFHC1-228ENST00000637121 CCDC180Q9P1Z9 1646 aa9.45□□□□□ -0.9
EFHC1-228ENST00000637121 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
EFHC1-228ENST00000637121 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
EFHC1-228ENST00000637121 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
EFHC1-228ENST00000637121 SHROOM4Q9ULL8 1493 aa9.06□□□□□ -0.96
EFHC1-228ENST00000637121 FOXD1Q16676 465 aa9.04□□□□□ -0.96
EFHC1-228ENST00000637121 PLPPR3Q6T4P5 718 aa8.93□□□□□ -0.98
EFHC1-228ENST00000637121 SUPT5HO00267 1087 aaKnown RBP8.92□□□□□ -0.98
EFHC1-228ENST00000637121 MYO15BQ96JP2 1530 aa8.92□□□□□ -0.98
EFHC1-228ENST00000637121 DCAF8L2P0C7V8 631 aa8.84□□□□□ -1
EFHC1-228ENST00000637121 ABCC9O60706 1549 aa8.77□□□□□ -1.01
EFHC1-228ENST00000637121 NACADO15069 1562 aa8.71□□□□□ -1.01
EFHC1-228ENST00000637121 PPP6R1Q9UPN7 881 aa8.66□□□□□ -1.02
EFHC1-228ENST00000637121 SCRIBQ14160 1630 aa8.64□□□□□ -1.03
EFHC1-228ENST00000637121 ADRA2BP18089 450 aa8.63□□□□□ -1.03
EFHC1-228ENST00000637121 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
EFHC1-228ENST00000637121 RB1CC1Q8TDY2 1594 aa8.59□□□□□ -1.03
EFHC1-228ENST00000637121 MYT1Q01538 1121 aa8.55□□□□□ -1.04
EFHC1-228ENST00000637121 PIAS4Q8N2W9 510 aaPredicted RBP8.49□□□□□ -1.05
EFHC1-228ENST00000637121 HRCP23327 699 aa8.49□□□□□ -1.05
EFHC1-228ENST00000637121 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
EFHC1-228ENST00000637121 BAZ1AQ9NRL2 1556 aaPredicted RBP8.47□□□□□ -1.05
EFHC1-228ENST00000637121 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
EFHC1-228ENST00000637121 TTBK1Q5TCY1 1321 aaPredicted RBP8.43□□□□□ -1.06
EFHC1-228ENST00000637121 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
EFHC1-228ENST00000637121 EHMT2Q96KQ7 1210 aa8.42□□□□□ -1.06
EFHC1-228ENST00000637121 CECR2Q9BXF3 1484 aa8.41□□□□□ -1.06
EFHC1-228ENST00000637121 PCGF6Q9BYE7 350 aa8.39□□□□□ -1.07
EFHC1-228ENST00000637121 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
EFHC1-228ENST00000637121 WIZO95785 1651 aa8.37□□□□□ -1.07
EFHC1-228ENST00000637121 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
EFHC1-228ENST00000637121 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
EFHC1-228ENST00000637121 SMARCA4P51532 1647 aa8.35□□□□□ -1.07
EFHC1-228ENST00000637121 EIF4G1Q04637 1599 aaKnown RBP8.34□□□□□ -1.07
EFHC1-228ENST00000637121 MSH5O43196 834 aa8.32□□□□□ -1.08
EFHC1-228ENST00000637121 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
EFHC1-228ENST00000637121 UNC13AQ9UPW8 1703 aa8.31□□□□□ -1.08
EFHC1-228ENST00000637121 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
EFHC1-228ENST00000637121 EEA1Q15075 1411 aa8.27□□□□□ -1.09
EFHC1-228ENST00000637121 SMARCA2P51531 1590 aa8.26□□□□□ -1.09
EFHC1-228ENST00000637121 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
EFHC1-228ENST00000637121 CCDC88BA6NC98 1476 aa8.24□□□□□ -1.09
EFHC1-228ENST00000637121 BICRAQ9NZM4 1560 aa8.21□□□□□ -1.1
EFHC1-228ENST00000637121 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
EFHC1-228ENST00000637121 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
EFHC1-228ENST00000637121 RTN4Q9NQC3 1192 aaKnown RBP8.17□□□□□ -1.1
EFHC1-228ENST00000637121 TNIKQ9UKE5 1360 aa8.15□□□□□ -1.1
EFHC1-228ENST00000637121 ABCC8Q09428 1581 aa8.14□□□□□ -1.11
EFHC1-228ENST00000637121 ATAD2BQ9ULI0 1458 aa8.12□□□□□ -1.11
EFHC1-228ENST00000637121 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
EFHC1-228ENST00000637121 BAZ1BQ9UIG0 1483 aaKnown RBP8.11□□□□□ -1.11
EFHC1-228ENST00000637121 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
EFHC1-228ENST00000637121 CEP162Q5TB80 1403 aa8.1□□□□□ -1.11
EFHC1-228ENST00000637121 CSRNP3Q8WYN3 585 aa8.09□□□□□ -1.11
EFHC1-228ENST00000637121 KIF21BO75037 1637 aa8.09□□□□□ -1.11
EFHC1-228ENST00000637121 CEP164Q9UPV0 1460 aa8.09□□□□□ -1.11
EFHC1-228ENST00000637121 NCBP3Q53F19 620 aaKnown RBP8.07□□□□□ -1.12
EFHC1-228ENST00000637121 SOGA1O94964 1423 aa8.07□□□□□ -1.12
EFHC1-228ENST00000637121 APLP2Q06481 763 aa8.06□□□□□ -1.12
EFHC1-228ENST00000637121 HMGXB3Q12766 1538 aa8.06□□□□□ -1.12
EFHC1-228ENST00000637121 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
EFHC1-228ENST00000637121 PABPN1Q86U42 306 aaKnown RBP eCLIP8.05□□□□□ -1.12
EFHC1-228ENST00000637121 SYNJ1O43426 1573 aa8.03□□□□□ -1.12
EFHC1-228ENST00000637121 ERICH6Q7L0X2 663 aa8.02□□□□□ -1.13
EFHC1-228ENST00000637121 TOP2BQ02880 1626 aa8.02□□□□□ -1.13
EFHC1-228ENST00000637121 NCAPD3P42695 1498 aa8.01□□□□□ -1.13
EFHC1-228ENST00000637121 BIVM-ERCC5R4GMW8 1640 aa8.01□□□□□ -1.13
EFHC1-228ENST00000637121 UBTFP17480 764 aaKnown RBP8□□□□□ -1.13
EFHC1-228ENST00000637121 ERICH3Q5RHP9 1530 aa7.99□□□□□ -1.13
EFHC1-228ENST00000637121 RUSC2Q8N2Y8 1516 aa7.98□□□□□ -1.13
EFHC1-228ENST00000637121 VPS8Q8N3P4 1428 aa7.97□□□□□ -1.13
EFHC1-228ENST00000637121 CLIP1P30622 1438 aa7.97□□□□□ -1.13
EFHC1-228ENST00000637121 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
EFHC1-228ENST00000637121 PRDM2Q13029 1718 aa7.93□□□□□ -1.14
EFHC1-228ENST00000637121 CFTRP13569 1480 aa7.93□□□□□ -1.14
EFHC1-228ENST00000637121 PRXQ9BXM0 1461 aa7.92□□□□□ -1.14
EFHC1-228ENST00000637121 RAPGEF2Q9Y4G8 1499 aa7.91□□□□□ -1.14
EFHC1-228ENST00000637121 KIF27Q86VH2 1401 aa7.91□□□□□ -1.14
EFHC1-228ENST00000637121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.9□□□□□ -1.15
EFHC1-228ENST00000637121 MAPK8IP2Q13387 824 aaPredicted RBP7.88□□□□□ -1.15
EFHC1-228ENST00000637121 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
EFHC1-228ENST00000637121 CUX1P39880 1505 aa7.87□□□□□ -1.15
EFHC1-228ENST00000637121 PPP4R3CPQ6ZMV5 832 aa7.87□□□□□ -1.15
EFHC1-228ENST00000637121 KCNA4P22459 653 aa7.84□□□□□ -1.15
EFHC1-228ENST00000637121 AMER1Q5JTC6 1135 aaPredicted RBP7.84□□□□□ -1.15
EFHC1-228ENST00000637121 SCAF1Q9H7N4 1312 aaKnown RBP7.83□□□□□ -1.16
EFHC1-228ENST00000637121 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
EFHC1-228ENST00000637121 MAP3K1Q13233 1512 aa7.82□□□□□ -1.16
EFHC1-228ENST00000637121 ARAP1Q96P48 1450 aa7.82□□□□□ -1.16
EFHC1-228ENST00000637121 DIEXFQ68CQ4 756 aaKnown RBP7.81□□□□□ -1.16
EFHC1-228ENST00000637121 CENPBP07199 599 aaPredicted RBP7.81□□□□□ -1.16
EFHC1-228ENST00000637121 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
EFHC1-228ENST00000637121 POTEDQ86YR6 584 aa7.79□□□□□ -1.16
EFHC1-228ENST00000637121 RRBP1Q9P2E9 1410 aaKnown RBP7.79□□□□□ -1.16
EFHC1-228ENST00000637121 CUX2O14529 1486 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms