RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
ARHGEF4-218ENST00000636987 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
ARHGEF4-218ENST00000636987 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
ARHGEF4-218ENST00000636987 ABCC9O60706 1549 aa17.42■□□□□ 0.38
ARHGEF4-218ENST00000636987 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
ARHGEF4-218ENST00000636987 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
ARHGEF4-218ENST00000636987 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
ARHGEF4-218ENST00000636987 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
ARHGEF4-218ENST00000636987 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
ARHGEF4-218ENST00000636987 HRCP23327 699 aa16.75■□□□□ 0.27
ARHGEF4-218ENST00000636987 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
ARHGEF4-218ENST00000636987 NACADO15069 1562 aa16.62■□□□□ 0.25
ARHGEF4-218ENST00000636987 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
ARHGEF4-218ENST00000636987 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
ARHGEF4-218ENST00000636987 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
ARHGEF4-218ENST00000636987 SCRIBQ14160 1630 aa16.52■□□□□ 0.23
ARHGEF4-218ENST00000636987 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
ARHGEF4-218ENST00000636987 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF4-218ENST00000636987 MYT1Q01538 1121 aa16.41■□□□□ 0.22
ARHGEF4-218ENST00000636987 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
ARHGEF4-218ENST00000636987 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
ARHGEF4-218ENST00000636987 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
ARHGEF4-218ENST00000636987 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
ARHGEF4-218ENST00000636987 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
ARHGEF4-218ENST00000636987 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
ARHGEF4-218ENST00000636987 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.15
ARHGEF4-218ENST00000636987 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
ARHGEF4-218ENST00000636987 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF4-218ENST00000636987 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF4-218ENST00000636987 ZEB1P37275 1124 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF4-218ENST00000636987 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
ARHGEF4-218ENST00000636987 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
ARHGEF4-218ENST00000636987 BAZ1AQ9NRL2 1556 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF4-218ENST00000636987 CENPBP07199 599 aaPredicted RBP15.69■□□□□ 0.1
ARHGEF4-218ENST00000636987 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
ARHGEF4-218ENST00000636987 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
ARHGEF4-218ENST00000636987 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
ARHGEF4-218ENST00000636987 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
ARHGEF4-218ENST00000636987 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
ARHGEF4-218ENST00000636987 YTHDC1Q96MU7 727 aaKnown RBP15.6■□□□□ 0.09
ARHGEF4-218ENST00000636987 WIZO95785 1651 aa15.59■□□□□ 0.09
ARHGEF4-218ENST00000636987 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
ARHGEF4-218ENST00000636987 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.08
ARHGEF4-218ENST00000636987 NEUROD1Q13562 356 aa15.57■□□□□ 0.08
ARHGEF4-218ENST00000636987 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
ARHGEF4-218ENST00000636987 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
ARHGEF4-218ENST00000636987 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
ARHGEF4-218ENST00000636987 APLP2Q06481 763 aa15.52■□□□□ 0.08
ARHGEF4-218ENST00000636987 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
ARHGEF4-218ENST00000636987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF4-218ENST00000636987 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
ARHGEF4-218ENST00000636987 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
ARHGEF4-218ENST00000636987 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
ARHGEF4-218ENST00000636987 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
ARHGEF4-218ENST00000636987 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
ARHGEF4-218ENST00000636987 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
ARHGEF4-218ENST00000636987 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
ARHGEF4-218ENST00000636987 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
ARHGEF4-218ENST00000636987 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
ARHGEF4-218ENST00000636987 NESP48681 1621 aa15.14■□□□□ 0.01
ARHGEF4-218ENST00000636987 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
ARHGEF4-218ENST00000636987 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
ARHGEF4-218ENST00000636987 CFTRP13569 1480 aa15□□□□□ -0.01
ARHGEF4-218ENST00000636987 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
ARHGEF4-218ENST00000636987 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
ARHGEF4-218ENST00000636987 ERCC6Q03468 1493 aa14.99□□□□□ -0.01
ARHGEF4-218ENST00000636987 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
ARHGEF4-218ENST00000636987 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
ARHGEF4-218ENST00000636987 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.02
ARHGEF4-218ENST00000636987 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
ARHGEF4-218ENST00000636987 MIER1Q8N108 512 aa14.94□□□□□ -0.02
ARHGEF4-218ENST00000636987 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
ARHGEF4-218ENST00000636987 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
ARHGEF4-218ENST00000636987 EIF5BO60841 1220 aaKnown RBP14.89□□□□□ -0.03
ARHGEF4-218ENST00000636987 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
ARHGEF4-218ENST00000636987 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
ARHGEF4-218ENST00000636987 BCANQ96GW7 911 aa14.87□□□□□ -0.03
ARHGEF4-218ENST00000636987 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
ARHGEF4-218ENST00000636987 UBTFP17480 764 aaKnown RBP14.81□□□□□ -0.04
ARHGEF4-218ENST00000636987 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF4-218ENST00000636987 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
ARHGEF4-218ENST00000636987 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
ARHGEF4-218ENST00000636987 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
ARHGEF4-218ENST00000636987 CUX1P39880 1505 aa14.73□□□□□ -0.05
ARHGEF4-218ENST00000636987 URB2Q14146 1524 aaKnown RBP14.71□□□□□ -0.05
ARHGEF4-218ENST00000636987 MRC2Q9UBG0 1479 aa14.71□□□□□ -0.06
ARHGEF4-218ENST00000636987 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
ARHGEF4-218ENST00000636987 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
ARHGEF4-218ENST00000636987 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
ARHGEF4-218ENST00000636987 SUPT16HQ9Y5B9 1047 aaKnown RBP14.68□□□□□ -0.06
ARHGEF4-218ENST00000636987 SOGA1O94964 1423 aa14.68□□□□□ -0.06
ARHGEF4-218ENST00000636987 DAXXQ9UER7 740 aaPredicted RBP14.68□□□□□ -0.06
ARHGEF4-218ENST00000636987 TDRD9Q8NDG6 1382 aaKnown RBP14.67□□□□□ -0.06
ARHGEF4-218ENST00000636987 NEFLP07196 543 aa14.66□□□□□ -0.06
ARHGEF4-218ENST00000636987 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
ARHGEF4-218ENST00000636987 FBLN2P98095 1184 aa14.63□□□□□ -0.07
ARHGEF4-218ENST00000636987 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF4-218ENST00000636987 CUX2O14529 1486 aa14.63□□□□□ -0.07
ARHGEF4-218ENST00000636987 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
ARHGEF4-218ENST00000636987 AEBP2Q6ZN18 517 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms