RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
THUMPD1-206ENST00000636554 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.76
THUMPD1-206ENST00000636554 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
THUMPD1-206ENST00000636554 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
THUMPD1-206ENST00000636554 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
THUMPD1-206ENST00000636554 HRCP23327 699 aa25.12■■□□□ 1.61
THUMPD1-206ENST00000636554 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
THUMPD1-206ENST00000636554 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
THUMPD1-206ENST00000636554 PCGF6Q9BYE7 350 aa24.87■■□□□ 1.57
THUMPD1-206ENST00000636554 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
THUMPD1-206ENST00000636554 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
THUMPD1-206ENST00000636554 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
THUMPD1-206ENST00000636554 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
THUMPD1-206ENST00000636554 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
THUMPD1-206ENST00000636554 ABCC9O60706 1549 aa24.04■■□□□ 1.44
THUMPD1-206ENST00000636554 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.41
THUMPD1-206ENST00000636554 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
THUMPD1-206ENST00000636554 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
THUMPD1-206ENST00000636554 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
THUMPD1-206ENST00000636554 FAM9AQ8IZU1 332 aaPredicted RBP23.74■■□□□ 1.39
THUMPD1-206ENST00000636554 ZEB1P37275 1124 aaPredicted RBP23.73■■□□□ 1.39
THUMPD1-206ENST00000636554 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.38
THUMPD1-206ENST00000636554 SCAF1Q9H7N4 1312 aaKnown RBP23.52■■□□□ 1.36
THUMPD1-206ENST00000636554 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
THUMPD1-206ENST00000636554 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
THUMPD1-206ENST00000636554 MROH2BQ7Z745 1585 aa23.3■■□□□ 1.32
THUMPD1-206ENST00000636554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
THUMPD1-206ENST00000636554 WIZO95785 1651 aa23.24■■□□□ 1.31
THUMPD1-206ENST00000636554 CCER1Q8TC90 406 aaPredicted RBP23.14■■□□□ 1.29
THUMPD1-206ENST00000636554 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
THUMPD1-206ENST00000636554 NACADO15069 1562 aa23.06■■□□□ 1.28
THUMPD1-206ENST00000636554 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
THUMPD1-206ENST00000636554 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
THUMPD1-206ENST00000636554 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
THUMPD1-206ENST00000636554 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
THUMPD1-206ENST00000636554 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
THUMPD1-206ENST00000636554 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
THUMPD1-206ENST00000636554 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
THUMPD1-206ENST00000636554 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
THUMPD1-206ENST00000636554 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
THUMPD1-206ENST00000636554 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
THUMPD1-206ENST00000636554 CENPBP07199 599 aaPredicted RBP22.78■■□□□ 1.24
THUMPD1-206ENST00000636554 SOGA1O94964 1423 aa22.77■■□□□ 1.24
THUMPD1-206ENST00000636554 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
THUMPD1-206ENST00000636554 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
THUMPD1-206ENST00000636554 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
THUMPD1-206ENST00000636554 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
THUMPD1-206ENST00000636554 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
THUMPD1-206ENST00000636554 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
THUMPD1-206ENST00000636554 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
THUMPD1-206ENST00000636554 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
THUMPD1-206ENST00000636554 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
THUMPD1-206ENST00000636554 EEA1Q15075 1411 aa22.53■■□□□ 1.2
THUMPD1-206ENST00000636554 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
THUMPD1-206ENST00000636554 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
THUMPD1-206ENST00000636554 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
THUMPD1-206ENST00000636554 MIER1Q8N108 512 aa22.42■■□□□ 1.18
THUMPD1-206ENST00000636554 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
THUMPD1-206ENST00000636554 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
THUMPD1-206ENST00000636554 CLIP1P30622 1438 aa22.3■■□□□ 1.16
THUMPD1-206ENST00000636554 KIF21BO75037 1637 aa22.29■■□□□ 1.16
THUMPD1-206ENST00000636554 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
THUMPD1-206ENST00000636554 MYT1Q01538 1121 aa22.24■■□□□ 1.15
THUMPD1-206ENST00000636554 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
THUMPD1-206ENST00000636554 RAPGEF2Q9Y4G8 1499 aa22.18■■□□□ 1.14
THUMPD1-206ENST00000636554 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
THUMPD1-206ENST00000636554 APLP2Q06481 763 aa22.12■■□□□ 1.13
THUMPD1-206ENST00000636554 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
THUMPD1-206ENST00000636554 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
THUMPD1-206ENST00000636554 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
THUMPD1-206ENST00000636554 DHX57Q6P158 1386 aaKnown RBP22.01■■□□□ 1.11
THUMPD1-206ENST00000636554 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
THUMPD1-206ENST00000636554 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
THUMPD1-206ENST00000636554 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
THUMPD1-206ENST00000636554 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
THUMPD1-206ENST00000636554 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
THUMPD1-206ENST00000636554 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.09
THUMPD1-206ENST00000636554 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
THUMPD1-206ENST00000636554 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
THUMPD1-206ENST00000636554 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
THUMPD1-206ENST00000636554 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
THUMPD1-206ENST00000636554 CUX2O14529 1486 aa21.7■■□□□ 1.06
THUMPD1-206ENST00000636554 ITGAEP38570 1179 aa21.7■■□□□ 1.06
THUMPD1-206ENST00000636554 KCNH8Q96L42 1107 aa21.69■■□□□ 1.06
THUMPD1-206ENST00000636554 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
THUMPD1-206ENST00000636554 TSHZ2Q9NRE2 1034 aa21.65■■□□□ 1.06
THUMPD1-206ENST00000636554 CUX1P39880 1505 aa21.65■■□□□ 1.06
THUMPD1-206ENST00000636554 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.05
THUMPD1-206ENST00000636554 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
THUMPD1-206ENST00000636554 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
THUMPD1-206ENST00000636554 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
THUMPD1-206ENST00000636554 BCANQ96GW7 911 aa21.52■■□□□ 1.04
THUMPD1-206ENST00000636554 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
THUMPD1-206ENST00000636554 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
THUMPD1-206ENST00000636554 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
THUMPD1-206ENST00000636554 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
THUMPD1-206ENST00000636554 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
THUMPD1-206ENST00000636554 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
THUMPD1-206ENST00000636554 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
THUMPD1-206ENST00000636554 FKBP8Q14318 412 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms