RNA–Protein interactions for RNA: ENST00000636507.1

CACNB4-227, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-227ENST00000636507 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
CACNB4-227ENST00000636507 MYT1Q01538 1121 aa8.84□□□□□ -0.99
CACNB4-227ENST00000636507 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
CACNB4-227ENST00000636507 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
CACNB4-227ENST00000636507 CCDC180Q9P1Z9 1646 aa8.44□□□□□ -1.06
CACNB4-227ENST00000636507 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
CACNB4-227ENST00000636507 DCAF1Q9Y4B6 1507 aa8.29□□□□□ -1.08
CACNB4-227ENST00000636507 HRCP23327 699 aa8.22□□□□□ -1.09
CACNB4-227ENST00000636507 ZCCHC6Q5VYS8 1495 aaKnown RBP8.18□□□□□ -1.1
CACNB4-227ENST00000636507 CLSPNQ9HAW4 1339 aa8.14□□□□□ -1.11
CACNB4-227ENST00000636507 MYO15BQ96JP2 1530 aa8.07□□□□□ -1.12
CACNB4-227ENST00000636507 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
CACNB4-227ENST00000636507 TRIM26Q12899 539 aaPredicted RBP7.99□□□□□ -1.13
CACNB4-227ENST00000636507 CHIC1Q5VXU3 224 aa7.83□□□□□ -1.16
CACNB4-227ENST00000636507 EEA1Q15075 1411 aa7.81□□□□□ -1.16
CACNB4-227ENST00000636507 ABCC9O60706 1549 aa7.81□□□□□ -1.16
CACNB4-227ENST00000636507 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
CACNB4-227ENST00000636507 RB1CC1Q8TDY2 1594 aa7.75□□□□□ -1.17
CACNB4-227ENST00000636507 SHROOM4Q9ULL8 1493 aa7.75□□□□□ -1.17
CACNB4-227ENST00000636507 SUPT5HO00267 1087 aaKnown RBP7.7□□□□□ -1.18
CACNB4-227ENST00000636507 PCGF6Q9BYE7 350 aa7.68□□□□□ -1.18
CACNB4-227ENST00000636507 NACADO15069 1562 aa7.67□□□□□ -1.18
CACNB4-227ENST00000636507 CCER1Q8TC90 406 aaPredicted RBP7.67□□□□□ -1.18
CACNB4-227ENST00000636507 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
CACNB4-227ENST00000636507 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
CACNB4-227ENST00000636507 ERICH6Q7L0X2 663 aa7.57□□□□□ -1.2
CACNB4-227ENST00000636507 TRIM41Q8WV44 630 aa7.53□□□□□ -1.2
CACNB4-227ENST00000636507 BAZ1AQ9NRL2 1556 aaPredicted RBP7.51□□□□□ -1.21
CACNB4-227ENST00000636507 BAZ1BQ9UIG0 1483 aaKnown RBP7.51□□□□□ -1.21
CACNB4-227ENST00000636507 FAM9AQ8IZU1 332 aaPredicted RBP7.49□□□□□ -1.21
CACNB4-227ENST00000636507 TNIKQ9UKE5 1360 aa7.49□□□□□ -1.21
CACNB4-227ENST00000636507 YTHDC1Q96MU7 727 aaKnown RBP7.48□□□□□ -1.21
CACNB4-227ENST00000636507 RSF1Q96T23 1441 aaPredicted RBP7.47□□□□□ -1.21
CACNB4-227ENST00000636507 ZNF316A6NFI3 1004 aaPredicted RBP7.47□□□□□ -1.21
CACNB4-227ENST00000636507 ERICH6BQ5W0A0 696 aa7.47□□□□□ -1.21
CACNB4-227ENST00000636507 GOLGA3Q08378 1498 aa7.47□□□□□ -1.21
CACNB4-227ENST00000636507 DIEXFQ68CQ4 756 aaKnown RBP7.45□□□□□ -1.22
CACNB4-227ENST00000636507 TIMELESSQ9UNS1 1208 aa7.45□□□□□ -1.22
CACNB4-227ENST00000636507 TOP2AP11388 1531 aaKnown RBP7.43□□□□□ -1.22
CACNB4-227ENST00000636507 APLP2Q06481 763 aa7.42□□□□□ -1.22
CACNB4-227ENST00000636507 KIF21BO75037 1637 aa7.42□□□□□ -1.22
CACNB4-227ENST00000636507 CEP164Q9UPV0 1460 aa7.41□□□□□ -1.22
CACNB4-227ENST00000636507 NEFLP07196 543 aa7.4□□□□□ -1.23
CACNB4-227ENST00000636507 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
CACNB4-227ENST00000636507 DCAF8L2P0C7V8 631 aa7.34□□□□□ -1.23
CACNB4-227ENST00000636507 MAP3K1Q13233 1512 aa7.34□□□□□ -1.23
CACNB4-227ENST00000636507 ERICH3Q5RHP9 1530 aa7.34□□□□□ -1.24
CACNB4-227ENST00000636507 EIF4G1Q04637 1599 aaKnown RBP7.33□□□□□ -1.24
CACNB4-227ENST00000636507 SMARCA2P51531 1590 aa7.33□□□□□ -1.24
CACNB4-227ENST00000636507 GTF3C3Q9Y5Q9 886 aa7.32□□□□□ -1.24
CACNB4-227ENST00000636507 ANP32EQ9BTT0 268 aa7.31□□□□□ -1.24
CACNB4-227ENST00000636507 CEP162Q5TB80 1403 aa7.3□□□□□ -1.24
CACNB4-227ENST00000636507 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
CACNB4-227ENST00000636507 CUX2O14529 1486 aa7.28□□□□□ -1.24
CACNB4-227ENST00000636507 SCRIBQ14160 1630 aa7.28□□□□□ -1.24
CACNB4-227ENST00000636507 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
CACNB4-227ENST00000636507 CCER2I3L3R5 266 aa7.27□□□□□ -1.25
CACNB4-227ENST00000636507 PPARGC1BQ86YN6 1023 aaKnown RBP7.25□□□□□ -1.25
CACNB4-227ENST00000636507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.24□□□□□ -1.25
CACNB4-227ENST00000636507 SMARCA4P51532 1647 aa7.23□□□□□ -1.25
CACNB4-227ENST00000636507 CSRNP3Q8WYN3 585 aa7.22□□□□□ -1.25
CACNB4-227ENST00000636507 NEUROD1Q13562 356 aa7.22□□□□□ -1.25
CACNB4-227ENST00000636507 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.26
CACNB4-227ENST00000636507 CLIP1P30622 1438 aa7.19□□□□□ -1.26
CACNB4-227ENST00000636507 FANCIQ9NVI1 1328 aa7.19□□□□□ -1.26
CACNB4-227ENST00000636507 LOC105371045A0A1W2PR82 267 aa7.18□□□□□ -1.26
CACNB4-227ENST00000636507 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
CACNB4-227ENST00000636507 FHAD1B1AJZ9 1412 aa7.16□□□□□ -1.26
CACNB4-227ENST00000636507 CDK11AQ9UQ88 783 aaPredicted RBP7.16□□□□□ -1.26
CACNB4-227ENST00000636507 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
CACNB4-227ENST00000636507 BIVM-ERCC5R4GMW8 1640 aa7.14□□□□□ -1.27
CACNB4-227ENST00000636507 CCDC18Q5T9S5 1454 aa7.14□□□□□ -1.27
CACNB4-227ENST00000636507 EFCAB5A4FU69 1503 aa7.12□□□□□ -1.27
CACNB4-227ENST00000636507 USP35Q9P2H5 1018 aa7.12□□□□□ -1.27
CACNB4-227ENST00000636507 THOC2Q8NI27 1593 aaKnown RBP7.11□□□□□ -1.27
CACNB4-227ENST00000636507 AQRO60306 1485 aaKnown RBP eCLIP7.11□□□□□ -1.27
CACNB4-227ENST00000636507 TOP2BQ02880 1626 aa7.1□□□□□ -1.27
CACNB4-227ENST00000636507 KIF21AQ7Z4S6 1674 aa7.1□□□□□ -1.27
CACNB4-227ENST00000636507 ANP32CO43423 234 aa7.1□□□□□ -1.27
CACNB4-227ENST00000636507 RTL5Q5HYW3 569 aaPredicted RBP7.1□□□□□ -1.27
CACNB4-227ENST00000636507 GLIPR1L2Q4G1C9 344 aa7.1□□□□□ -1.27
CACNB4-227ENST00000636507 CUX1P39880 1505 aa7.1□□□□□ -1.27
CACNB4-227ENST00000636507 WIZO95785 1651 aa7.09□□□□□ -1.27
CACNB4-227ENST00000636507 UBTFP17480 764 aaKnown RBP7.09□□□□□ -1.27
CACNB4-227ENST00000636507 CCDC88BA6NC98 1476 aa7.09□□□□□ -1.27
CACNB4-227ENST00000636507 KTN1Q86UP2 1357 aaKnown RBP7.09□□□□□ -1.28
CACNB4-227ENST00000636507 KIF27Q86VH2 1401 aa7.08□□□□□ -1.28
CACNB4-227ENST00000636507 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
CACNB4-227ENST00000636507 HMGXB3Q12766 1538 aa7.08□□□□□ -1.28
CACNB4-227ENST00000636507 SYNJ1O43426 1573 aa7.08□□□□□ -1.28
CACNB4-227ENST00000636507 SUPT16HQ9Y5B9 1047 aaKnown RBP7.07□□□□□ -1.28
CACNB4-227ENST00000636507 PRDM2Q13029 1718 aa7.07□□□□□ -1.28
CACNB4-227ENST00000636507 CCNB3Q8WWL7 1395 aa7.06□□□□□ -1.28
CACNB4-227ENST00000636507 DDRGK1Q96HY6 314 aa7.06□□□□□ -1.28
CACNB4-227ENST00000636507 AKNAQ7Z591 1439 aa7.06□□□□□ -1.28
CACNB4-227ENST00000636507 CCDC144AA2RUR9 1427 aa7.05□□□□□ -1.28
CACNB4-227ENST00000636507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.05□□□□□ -1.28
CACNB4-227ENST00000636507 INSRP06213 1382 aa7.05□□□□□ -1.28
CACNB4-227ENST00000636507 PPM1GO15355 546 aaPredicted RBP7.04□□□□□ -1.28
CACNB4-227ENST00000636507 ABCC8Q09428 1581 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms