RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 DNAJC5Q9H3Z4 198 aa3.01□□□□□ -1.93
SYNGAP1-213ENST00000636193 ILDR1Q86SU0 546 aaPredicted RBP2.88□□□□□ -1.95
SYNGAP1-213ENST00000636193 AEBP2Q6ZN18 517 aaPredicted RBP2.82□□□□□ -1.96
SYNGAP1-213ENST00000636193 SOCS7O14512 581 aa2.68□□□□□ -1.98
SYNGAP1-213ENST00000636193 TRIM41Q8WV44 630 aa2.65□□□□□ -1.99
SYNGAP1-213ENST00000636193 IFFO2Q5TF58 517 aa2.55□□□□□ -2
SYNGAP1-213ENST00000636193 LMTK3Q96Q04 1460 aa2.55□□□□□ -2
SYNGAP1-213ENST00000636193 ILDR2Q71H61 639 aa2.47□□□□□ -2.01
SYNGAP1-213ENST00000636193 PCDH10Q9P2E7 1040 aa2.44□□□□□ -2.02
SYNGAP1-213ENST00000636193 DNAJC5BQ9UF47 199 aa2.37□□□□□ -2.03
SYNGAP1-213ENST00000636193 RBAK-RBAKDNI3L0D1 243 aa2.36□□□□□ -2.03
SYNGAP1-213ENST00000636193 SLC34A2O95436 690 aa2.35□□□□□ -2.03
SYNGAP1-213ENST00000636193 DISP3Q9P2K9 1392 aa2.35□□□□□ -2.03
SYNGAP1-213ENST00000636193 IGSF5Q9NSI5 407 aa2.32□□□□□ -2.04
SYNGAP1-213ENST00000636193 FBXO41Q8TF61 875 aa2.29□□□□□ -2.04
SYNGAP1-213ENST00000636193 MPNDQ8N594 471 aa2.2□□□□□ -2.06
SYNGAP1-213ENST00000636193 UNC79Q9P2D8 2635 aa2.18□□□□□ -2.06
SYNGAP1-213ENST00000636193 PPP6R1Q9UPN7 881 aa2.13□□□□□ -2.07
SYNGAP1-213ENST00000636193 COL26A1Q96A83 441 aa2.07□□□□□ -2.08
SYNGAP1-213ENST00000636193 CACNA1AO00555 2505 aa2.05□□□□□ -2.08
SYNGAP1-213ENST00000636193 DACH1Q9UI36 760 aa2.04□□□□□ -2.08
SYNGAP1-213ENST00000636193 TRHP20396 242 aaPredicted RBP2.03□□□□□ -2.08
SYNGAP1-213ENST00000636193 CAPN15O75808 1086 aa2.02□□□□□ -2.09
SYNGAP1-213ENST00000636193 PKD1L2Q7Z442 2459 aa2.02□□□□□ -2.09
SYNGAP1-213ENST00000636193 PLPPR3Q6T4P5 718 aa2.01□□□□□ -2.09
SYNGAP1-213ENST00000636193 SENP3-EIF4A1A0A087X0R7 540 aa1.98□□□□□ -2.09
SYNGAP1-213ENST00000636193 SPATA31D1Q6ZQQ2 1576 aa1.98□□□□□ -2.09
SYNGAP1-213ENST00000636193 KMT2BQ9UMN6 2715 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-213ENST00000636193 PITPNM2Q9BZ72 1349 aa1.91□□□□□ -2.1
SYNGAP1-213ENST00000636193 ERCC6L2Q5T890 1561 aa1.91□□□□□ -2.1
SYNGAP1-213ENST00000636193 CACNA1GO43497 2377 aa1.89□□□□□ -2.11
SYNGAP1-213ENST00000636193 DLL1O00548 723 aa1.88□□□□□ -2.11
SYNGAP1-213ENST00000636193 PRELPP51888 382 aa1.88□□□□□ -2.11
SYNGAP1-213ENST00000636193 RBM33Q96EV2 1170 aaKnown RBP1.84□□□□□ -2.11
SYNGAP1-213ENST00000636193 PABPN1Q86U42 306 aaKnown RBP eCLIP1.82□□□□□ -2.12
SYNGAP1-213ENST00000636193 SNX27Q96L92 541 aa1.82□□□□□ -2.12
SYNGAP1-213ENST00000636193 YY1P25490 414 aa1.81□□□□□ -2.12
SYNGAP1-213ENST00000636193 KDM4FA0A1W2PPD8 638 aa1.79□□□□□ -2.12
SYNGAP1-213ENST00000636193 TAOK2Q9UL54 1235 aa1.79□□□□□ -2.12
SYNGAP1-213ENST00000636193 SYNJ2O15056 1496 aa1.78□□□□□ -2.12
SYNGAP1-213ENST00000636193 EVX2Q03828 476 aa1.78□□□□□ -2.12
SYNGAP1-213ENST00000636193 TNS4Q8IZW8 715 aa1.78□□□□□ -2.12
SYNGAP1-213ENST00000636193 PHF23Q9BUL5 403 aaPredicted RBP1.77□□□□□ -2.13
SYNGAP1-213ENST00000636193 C1QTNF8P60827 252 aa1.76□□□□□ -2.13
SYNGAP1-213ENST00000636193 FOXD1Q16676 465 aa1.76□□□□□ -2.13
SYNGAP1-213ENST00000636193 CERKQ8TCT0 537 aa1.75□□□□□ -2.13
SYNGAP1-213ENST00000636193 SLC51AQ86UW1 340 aa1.74□□□□□ -2.13
SYNGAP1-213ENST00000636193 RP1L1Q8IWN7 2480 aaPredicted RBP1.74□□□□□ -2.13
SYNGAP1-213ENST00000636193 HECW2Q9P2P5 1572 aa1.72□□□□□ -2.13
SYNGAP1-213ENST00000636193 TRANK1O15050 2925 aa1.71□□□□□ -2.14
SYNGAP1-213ENST00000636193 KCTD2Q14681 263 aa1.71□□□□□ -2.14
SYNGAP1-213ENST00000636193 COL13A1Q5TAT6 717 aaPredicted RBP1.71□□□□□ -2.14
SYNGAP1-213ENST00000636193 CHD8Q9HCK8 2581 aa1.71□□□□□ -2.14
SYNGAP1-213ENST00000636193 BAHCC1Q9P281 2608 aa1.7□□□□□ -2.14
SYNGAP1-213ENST00000636193 PPEF1O14829 653 aaPredicted RBP1.69□□□□□ -2.14
SYNGAP1-213ENST00000636193 FAM161AQ3B820 660 aa1.69□□□□□ -2.14
SYNGAP1-213ENST00000636193 SLC4A5Q9BY07 1137 aa1.69□□□□□ -2.14
SYNGAP1-213ENST00000636193 SRCAPQ6ZRS2 3230 aa1.68□□□□□ -2.14
SYNGAP1-213ENST00000636193 SLC17A8Q8NDX2 589 aa1.66□□□□□ -2.14
SYNGAP1-213ENST00000636193 WWC3Q9ULE0 1092 aa1.66□□□□□ -2.14
SYNGAP1-213ENST00000636193 USP24Q9UPU5 2620 aa1.65□□□□□ -2.15
SYNGAP1-213ENST00000636193 CUX2O14529 1486 aa1.65□□□□□ -2.15
SYNGAP1-213ENST00000636193 CUL9Q8IWT3 2517 aa1.65□□□□□ -2.15
SYNGAP1-213ENST00000636193 FAM122AQ96E09 287 aa1.64□□□□□ -2.15
SYNGAP1-213ENST00000636193 KRT38O76015 456 aa1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 MLLT1Q03111 559 aaPredicted RBP1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 CYB5RLQ6IPT4 315 aa1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 CHADLQ6NUI6 762 aa1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 UPF1Q92900 1129 aaKnown RBP eCLIP1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 ZRANB1Q9UGI0 708 aa1.63□□□□□ -2.15
SYNGAP1-213ENST00000636193 USP9XQ93008 2570 aaPredicted RBP1.61□□□□□ -2.15
SYNGAP1-213ENST00000636193 ADRA2BP18089 450 aa1.61□□□□□ -2.15
SYNGAP1-213ENST00000636193 LURAP1LQ8IV03 231 aa1.61□□□□□ -2.15
SYNGAP1-213ENST00000636193 DCAF8L1A6NGE4 600 aa1.6□□□□□ -2.15
SYNGAP1-213ENST00000636193 COL9A2Q14055 689 aaPredicted RBP1.6□□□□□ -2.15
SYNGAP1-213ENST00000636193 ZNF784Q8NCA9 323 aaPredicted RBP1.6□□□□□ -2.15
SYNGAP1-213ENST00000636193 TNS2Q63HR2 1409 aa1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 SETXQ7Z333 2677 aaKnown RBP1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 ZNF462Q96JM2 2506 aa1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 HOXD11P31277 338 aaPredicted RBP1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 PLA2G5P39877 138 aa1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 ATF5Q9Y2D1 282 aaPredicted RBP1.59□□□□□ -2.15
SYNGAP1-213ENST00000636193 ATRXP46100 2492 aa1.59□□□□□ -2.16
SYNGAP1-213ENST00000636193 COL9A1P20849 921 aa1.58□□□□□ -2.16
SYNGAP1-213ENST00000636193 FAM117BQ6P1L5 589 aa1.58□□□□□ -2.16
SYNGAP1-213ENST00000636193 OSCARQ8IYS5 282 aa1.58□□□□□ -2.16
SYNGAP1-213ENST00000636193 MAST4O15021 2626 aa1.57□□□□□ -2.16
SYNGAP1-213ENST00000636193 CEP350Q5VT06 3117 aa1.56□□□□□ -2.16
SYNGAP1-213ENST00000636193 GIGYF1O75420 1035 aaPredicted RBP1.56□□□□□ -2.16
SYNGAP1-213ENST00000636193 TRPM4Q8TD43 1214 aa1.56□□□□□ -2.16
SYNGAP1-213ENST00000636193 KRTAP17-1Q9BYP8 105 aa1.56□□□□□ -2.16
SYNGAP1-213ENST00000636193 TMEM121BQ9BXQ6 578 aaPredicted RBP1.55□□□□□ -2.16
SYNGAP1-213ENST00000636193 MED1Q15648 1581 aaPredicted RBP1.55□□□□□ -2.16
SYNGAP1-213ENST00000636193 ACAP1Q15027 740 aa1.54□□□□□ -2.16
SYNGAP1-213ENST00000636193 MAP3K11Q16584 847 aa1.54□□□□□ -2.16
SYNGAP1-213ENST00000636193 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.54□□□□□ -2.16
SYNGAP1-213ENST00000636193 EHMT2Q96KQ7 1210 aa1.54□□□□□ -2.16
SYNGAP1-213ENST00000636193 ANKRD11Q6UB99 2663 aaPredicted RBP1.54□□□□□ -2.16
SYNGAP1-213ENST00000636193 PTPN13Q12923 2485 aa1.53□□□□□ -2.16
SYNGAP1-213ENST00000636193 ASXL2Q76L83 1435 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms