RNA–Protein interactions for RNA: ENST00000635905.1

CLN5-205, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-205ENST00000635905 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
CLN5-205ENST00000635905 SHROOM4Q9ULL8 1493 aa32.86■■■□□ 2.85
CLN5-205ENST00000635905 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
CLN5-205ENST00000635905 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
CLN5-205ENST00000635905 CCDC180Q9P1Z9 1646 aa32.26■■■□□ 2.76
CLN5-205ENST00000635905 HRCP23327 699 aa32.22■■■□□ 2.75
CLN5-205ENST00000635905 MYO15BQ96JP2 1530 aa32.01■■■□□ 2.71
CLN5-205ENST00000635905 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
CLN5-205ENST00000635905 CHIC1Q5VXU3 224 aa31.9■■■□□ 2.7
CLN5-205ENST00000635905 PCGF6Q9BYE7 350 aa31.81■■■□□ 2.68
CLN5-205ENST00000635905 PPARGC1BQ86YN6 1023 aaKnown RBP31.63■■■□□ 2.65
CLN5-205ENST00000635905 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
CLN5-205ENST00000635905 LOC105371045A0A1W2PR82 267 aa31.14■■■□□ 2.58
CLN5-205ENST00000635905 ABCC9O60706 1549 aa31.12■■■□□ 2.57
CLN5-205ENST00000635905 TRIM26Q12899 539 aaPredicted RBP30.85■■■□□ 2.53
CLN5-205ENST00000635905 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
CLN5-205ENST00000635905 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
CLN5-205ENST00000635905 PELP1Q8IZL8 1130 aaKnown RBP30.32■■■□□ 2.44
CLN5-205ENST00000635905 SCAF1Q9H7N4 1312 aaKnown RBP30.26■■■□□ 2.43
CLN5-205ENST00000635905 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
CLN5-205ENST00000635905 FAM9AQ8IZU1 332 aaPredicted RBP30.13■■■□□ 2.41
CLN5-205ENST00000635905 NACADO15069 1562 aa30.09■■■□□ 2.41
CLN5-205ENST00000635905 EHMT2Q96KQ7 1210 aa30■■■□□ 2.39
CLN5-205ENST00000635905 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
CLN5-205ENST00000635905 CECR2Q9BXF3 1484 aa29.95■■■□□ 2.38
CLN5-205ENST00000635905 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
CLN5-205ENST00000635905 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
CLN5-205ENST00000635905 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
CLN5-205ENST00000635905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.64■■■□□ 2.34
CLN5-205ENST00000635905 ACIN1Q9UKV3 1341 aaKnown RBP29.63■■■□□ 2.33
CLN5-205ENST00000635905 NEUROD1Q13562 356 aa29.6■■■□□ 2.33
CLN5-205ENST00000635905 CCER1Q8TC90 406 aaPredicted RBP29.54■■■□□ 2.32
CLN5-205ENST00000635905 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
CLN5-205ENST00000635905 WIZO95785 1651 aa29.47■■■□□ 2.31
CLN5-205ENST00000635905 GTF3C3Q9Y5Q9 886 aa29.38■■■□□ 2.29
CLN5-205ENST00000635905 DIEXFQ68CQ4 756 aaKnown RBP29.37■■■□□ 2.29
CLN5-205ENST00000635905 CENPBP07199 599 aaPredicted RBP29.28■■■□□ 2.28
CLN5-205ENST00000635905 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
CLN5-205ENST00000635905 TTBK1Q5TCY1 1321 aaPredicted RBP29.21■■■□□ 2.27
CLN5-205ENST00000635905 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
CLN5-205ENST00000635905 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
CLN5-205ENST00000635905 MYT1Q01538 1121 aa28.96■■■□□ 2.23
CLN5-205ENST00000635905 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.22
CLN5-205ENST00000635905 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
CLN5-205ENST00000635905 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
CLN5-205ENST00000635905 CEP162Q5TB80 1403 aa28.89■■■□□ 2.21
CLN5-205ENST00000635905 YTHDC1Q96MU7 727 aaKnown RBP28.88■■■□□ 2.21
CLN5-205ENST00000635905 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
CLN5-205ENST00000635905 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
CLN5-205ENST00000635905 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
CLN5-205ENST00000635905 SOGA1O94964 1423 aa28.72■■■□□ 2.19
CLN5-205ENST00000635905 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
CLN5-205ENST00000635905 MIER1Q8N108 512 aa28.68■■■□□ 2.18
CLN5-205ENST00000635905 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
CLN5-205ENST00000635905 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
CLN5-205ENST00000635905 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
CLN5-205ENST00000635905 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
CLN5-205ENST00000635905 HNRNPUL2Q1KMD3 747 aaKnown RBP28.55■■■□□ 2.16
CLN5-205ENST00000635905 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
CLN5-205ENST00000635905 EEA1Q15075 1411 aa28.44■■■□□ 2.14
CLN5-205ENST00000635905 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
CLN5-205ENST00000635905 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.14
CLN5-205ENST00000635905 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
CLN5-205ENST00000635905 CLIP1P30622 1438 aa28.18■■■□□ 2.1
CLN5-205ENST00000635905 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.1
CLN5-205ENST00000635905 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
CLN5-205ENST00000635905 APLP2Q06481 763 aa28.11■■■□□ 2.09
CLN5-205ENST00000635905 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.09
CLN5-205ENST00000635905 SUPT16HQ9Y5B9 1047 aaKnown RBP28.07■■■□□ 2.08
CLN5-205ENST00000635905 KIF21BO75037 1637 aa28.03■■■□□ 2.08
CLN5-205ENST00000635905 SYNJ1O43426 1573 aa28.01■■■□□ 2.07
CLN5-205ENST00000635905 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
CLN5-205ENST00000635905 CLSPNQ9HAW4 1339 aa27.94■■■□□ 2.06
CLN5-205ENST00000635905 RAPGEF2Q9Y4G8 1499 aa27.94■■■□□ 2.06
CLN5-205ENST00000635905 DHX57Q6P158 1386 aaKnown RBP27.94■■■□□ 2.06
CLN5-205ENST00000635905 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
CLN5-205ENST00000635905 TSHZ2Q9NRE2 1034 aa27.84■■■□□ 2.05
CLN5-205ENST00000635905 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
CLN5-205ENST00000635905 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
CLN5-205ENST00000635905 KANK4Q5T7N3 995 aaPredicted RBP27.73■■■□□ 2.03
CLN5-205ENST00000635905 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
CLN5-205ENST00000635905 ANP32EQ9BTT0 268 aa27.65■■■□□ 2.02
CLN5-205ENST00000635905 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
CLN5-205ENST00000635905 CUX1P39880 1505 aa27.6■■■□□ 2.01
CLN5-205ENST00000635905 CFTRP13569 1480 aa27.59■■■□□ 2.01
CLN5-205ENST00000635905 BCANQ96GW7 911 aa27.57■■■□□ 2
CLN5-205ENST00000635905 NESP48681 1621 aa27.55■■■□□ 2
CLN5-205ENST00000635905 RRBP1Q9P2E9 1410 aaKnown RBP27.54■■■□□ 2
CLN5-205ENST00000635905 ITGAEP38570 1179 aa27.54■■■□□ 2
CLN5-205ENST00000635905 TOP2BQ02880 1626 aa27.53■■■□□ 2
CLN5-205ENST00000635905 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
CLN5-205ENST00000635905 PRXQ9BXM0 1461 aa27.47■■□□□ 1.99
CLN5-205ENST00000635905 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
CLN5-205ENST00000635905 CUX2O14529 1486 aa27.46■■□□□ 1.99
CLN5-205ENST00000635905 FKBP8Q14318 412 aa27.44■■□□□ 1.98
CLN5-205ENST00000635905 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
CLN5-205ENST00000635905 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
CLN5-205ENST00000635905 DDX10Q13206 875 aaKnown RBP27.37■■□□□ 1.97
CLN5-205ENST00000635905 RAB3GAP2Q9H2M9 1393 aa27.36■■□□□ 1.97
CLN5-205ENST00000635905 MAPKBP1O60336 1514 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms