RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
CCDC163-206ENST00000629009 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
CCDC163-206ENST00000629009 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
CCDC163-206ENST00000629009 ABCC9O60706 1549 aa17.95■□□□□ 0.46
CCDC163-206ENST00000629009 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
CCDC163-206ENST00000629009 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
CCDC163-206ENST00000629009 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
CCDC163-206ENST00000629009 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
CCDC163-206ENST00000629009 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
CCDC163-206ENST00000629009 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
CCDC163-206ENST00000629009 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
CCDC163-206ENST00000629009 UNC13AQ9UPW8 1703 aa16.78■□□□□ 0.28
CCDC163-206ENST00000629009 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
CCDC163-206ENST00000629009 NACADO15069 1562 aa16.72■□□□□ 0.27
CCDC163-206ENST00000629009 KCNA4P22459 653 aa16.69■□□□□ 0.26
CCDC163-206ENST00000629009 MYO15BQ96JP2 1530 aa16.69■□□□□ 0.26
CCDC163-206ENST00000629009 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
CCDC163-206ENST00000629009 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
CCDC163-206ENST00000629009 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
CCDC163-206ENST00000629009 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC163-206ENST00000629009 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
CCDC163-206ENST00000629009 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
CCDC163-206ENST00000629009 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
CCDC163-206ENST00000629009 CC2D2AQ9P2K1 1620 aa16.28■□□□□ 0.2
CCDC163-206ENST00000629009 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.18
CCDC163-206ENST00000629009 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
CCDC163-206ENST00000629009 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
CCDC163-206ENST00000629009 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
CCDC163-206ENST00000629009 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
CCDC163-206ENST00000629009 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
CCDC163-206ENST00000629009 ADRA2BP18089 450 aa15.97■□□□□ 0.15
CCDC163-206ENST00000629009 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
CCDC163-206ENST00000629009 CUX2O14529 1486 aa15.67■□□□□ 0.1
CCDC163-206ENST00000629009 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
CCDC163-206ENST00000629009 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
CCDC163-206ENST00000629009 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
CCDC163-206ENST00000629009 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
CCDC163-206ENST00000629009 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
CCDC163-206ENST00000629009 MROH2BQ7Z745 1585 aa15.43■□□□□ 0.06
CCDC163-206ENST00000629009 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
CCDC163-206ENST00000629009 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
CCDC163-206ENST00000629009 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
CCDC163-206ENST00000629009 ZBTB22O15209 634 aa15.38■□□□□ 0.05
CCDC163-206ENST00000629009 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
CCDC163-206ENST00000629009 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
CCDC163-206ENST00000629009 NESP48681 1621 aa15.33■□□□□ 0.04
CCDC163-206ENST00000629009 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
CCDC163-206ENST00000629009 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
CCDC163-206ENST00000629009 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
CCDC163-206ENST00000629009 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
CCDC163-206ENST00000629009 WIZO95785 1651 aa15.25■□□□□ 0.03
CCDC163-206ENST00000629009 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
CCDC163-206ENST00000629009 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
CCDC163-206ENST00000629009 PRKCSHP14314 528 aaPredicted RBP15.16■□□□□ 0.02
CCDC163-206ENST00000629009 DAXXQ9UER7 740 aaPredicted RBP15.16■□□□□ 0.02
CCDC163-206ENST00000629009 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
CCDC163-206ENST00000629009 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
CCDC163-206ENST00000629009 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
CCDC163-206ENST00000629009 BCANQ96GW7 911 aa15.01□□□□□ -0.01
CCDC163-206ENST00000629009 WDR62O43379 1518 aa14.99□□□□□ -0.01
CCDC163-206ENST00000629009 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
CCDC163-206ENST00000629009 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
CCDC163-206ENST00000629009 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
CCDC163-206ENST00000629009 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
CCDC163-206ENST00000629009 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
CCDC163-206ENST00000629009 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
CCDC163-206ENST00000629009 PLCB2Q00722 1185 aa14.93□□□□□ -0.02
CCDC163-206ENST00000629009 FKBP8Q14318 412 aa14.91□□□□□ -0.02
CCDC163-206ENST00000629009 CFTRP13569 1480 aa14.9□□□□□ -0.02
CCDC163-206ENST00000629009 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
CCDC163-206ENST00000629009 RIMBP3CA6NJZ7 1639 aa14.82□□□□□ -0.04
CCDC163-206ENST00000629009 RIMBP3BA6NNM3 1639 aa14.82□□□□□ -0.04
CCDC163-206ENST00000629009 RIMBP3Q9UFD9 1639 aa14.82□□□□□ -0.04
CCDC163-206ENST00000629009 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
CCDC163-206ENST00000629009 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
CCDC163-206ENST00000629009 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
CCDC163-206ENST00000629009 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
CCDC163-206ENST00000629009 ARXQ96QS3 562 aa14.76□□□□□ -0.05
CCDC163-206ENST00000629009 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
CCDC163-206ENST00000629009 TPRNQ4KMQ1 711 aa14.71□□□□□ -0.05
CCDC163-206ENST00000629009 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
CCDC163-206ENST00000629009 ARHGEF11O15085 1522 aa14.67□□□□□ -0.06
CCDC163-206ENST00000629009 FOXD1Q16676 465 aa14.65□□□□□ -0.06
CCDC163-206ENST00000629009 TIMELESSQ9UNS1 1208 aa14.65□□□□□ -0.06
CCDC163-206ENST00000629009 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
CCDC163-206ENST00000629009 CHD1O14646 1710 aa14.57□□□□□ -0.08
CCDC163-206ENST00000629009 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
CCDC163-206ENST00000629009 TOPBP1Q92547 1522 aa14.55□□□□□ -0.08
CCDC163-206ENST00000629009 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
CCDC163-206ENST00000629009 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
CCDC163-206ENST00000629009 TULP1O00294 542 aaPredicted RBP14.54□□□□□ -0.08
CCDC163-206ENST00000629009 VSIG10Q8N0Z9 540 aa14.54□□□□□ -0.08
CCDC163-206ENST00000629009 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
CCDC163-206ENST00000629009 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
CCDC163-206ENST00000629009 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
CCDC163-206ENST00000629009 CUX1P39880 1505 aa14.47□□□□□ -0.09
CCDC163-206ENST00000629009 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
CCDC163-206ENST00000629009 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
CCDC163-206ENST00000629009 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
CCDC163-206ENST00000629009 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms