RNA–Protein interactions for RNA: ENST00000626595.2

TCF4-255, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-255ENST00000626595 AEBP2Q6ZN18 517 aaPredicted RBP24.85■■□□□ 1.57
TCF4-255ENST00000626595 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
TCF4-255ENST00000626595 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
TCF4-255ENST00000626595 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
TCF4-255ENST00000626595 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
TCF4-255ENST00000626595 FOXD1Q16676 465 aa19.56■□□□□ 0.72
TCF4-255ENST00000626595 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
TCF4-255ENST00000626595 ADRA2BP18089 450 aa18.79■□□□□ 0.6
TCF4-255ENST00000626595 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
TCF4-255ENST00000626595 MSH5O43196 834 aa18.05■□□□□ 0.48
TCF4-255ENST00000626595 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
TCF4-255ENST00000626595 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
TCF4-255ENST00000626595 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
TCF4-255ENST00000626595 ABCC9O60706 1549 aa17.06■□□□□ 0.32
TCF4-255ENST00000626595 MAPK8IP2Q13387 824 aaPredicted RBP17.04■□□□□ 0.32
TCF4-255ENST00000626595 KCNA4P22459 653 aa16.98■□□□□ 0.31
TCF4-255ENST00000626595 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
TCF4-255ENST00000626595 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
TCF4-255ENST00000626595 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
TCF4-255ENST00000626595 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
TCF4-255ENST00000626595 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
TCF4-255ENST00000626595 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
TCF4-255ENST00000626595 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
TCF4-255ENST00000626595 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
TCF4-255ENST00000626595 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
TCF4-255ENST00000626595 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
TCF4-255ENST00000626595 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
TCF4-255ENST00000626595 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
TCF4-255ENST00000626595 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
TCF4-255ENST00000626595 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
TCF4-255ENST00000626595 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
TCF4-255ENST00000626595 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
TCF4-255ENST00000626595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
TCF4-255ENST00000626595 NACADO15069 1562 aa15.63■□□□□ 0.09
TCF4-255ENST00000626595 ZBTB22O15209 634 aa15.63■□□□□ 0.09
TCF4-255ENST00000626595 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
TCF4-255ENST00000626595 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
TCF4-255ENST00000626595 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
TCF4-255ENST00000626595 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
TCF4-255ENST00000626595 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
TCF4-255ENST00000626595 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.06
TCF4-255ENST00000626595 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
TCF4-255ENST00000626595 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
TCF4-255ENST00000626595 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
TCF4-255ENST00000626595 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
TCF4-255ENST00000626595 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
TCF4-255ENST00000626595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
TCF4-255ENST00000626595 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
TCF4-255ENST00000626595 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
TCF4-255ENST00000626595 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
TCF4-255ENST00000626595 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
TCF4-255ENST00000626595 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
TCF4-255ENST00000626595 APLP2Q06481 763 aa15.09■□□□□ 0.01
TCF4-255ENST00000626595 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
TCF4-255ENST00000626595 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
TCF4-255ENST00000626595 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
TCF4-255ENST00000626595 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
TCF4-255ENST00000626595 CUX2O14529 1486 aa14.97□□□□□ -0.01
TCF4-255ENST00000626595 CAPN15O75808 1086 aa14.94□□□□□ -0.02
TCF4-255ENST00000626595 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
TCF4-255ENST00000626595 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
TCF4-255ENST00000626595 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
TCF4-255ENST00000626595 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
TCF4-255ENST00000626595 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
TCF4-255ENST00000626595 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
TCF4-255ENST00000626595 DSG3P32926 999 aa14.71□□□□□ -0.05
TCF4-255ENST00000626595 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
TCF4-255ENST00000626595 ABCB7O75027 752 aa14.67□□□□□ -0.06
TCF4-255ENST00000626595 POLA2Q14181 598 aa14.62□□□□□ -0.07
TCF4-255ENST00000626595 NCAPD3P42695 1498 aa14.5□□□□□ -0.09
TCF4-255ENST00000626595 NESP48681 1621 aa14.45□□□□□ -0.1
TCF4-255ENST00000626595 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
TCF4-255ENST00000626595 THOC2Q8NI27 1593 aaKnown RBP14.35□□□□□ -0.11
TCF4-255ENST00000626595 FBLN2P98095 1184 aa14.35□□□□□ -0.11
TCF4-255ENST00000626595 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
TCF4-255ENST00000626595 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
TCF4-255ENST00000626595 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
TCF4-255ENST00000626595 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
TCF4-255ENST00000626595 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
TCF4-255ENST00000626595 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
TCF4-255ENST00000626595 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
TCF4-255ENST00000626595 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
TCF4-255ENST00000626595 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
TCF4-255ENST00000626595 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
TCF4-255ENST00000626595 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
TCF4-255ENST00000626595 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
TCF4-255ENST00000626595 WDR62O43379 1518 aa14.05□□□□□ -0.16
TCF4-255ENST00000626595 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
TCF4-255ENST00000626595 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
TCF4-255ENST00000626595 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
TCF4-255ENST00000626595 FKBP8Q14318 412 aa14.03□□□□□ -0.16
TCF4-255ENST00000626595 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
TCF4-255ENST00000626595 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
TCF4-255ENST00000626595 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
TCF4-255ENST00000626595 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
TCF4-255ENST00000626595 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
TCF4-255ENST00000626595 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
TCF4-255ENST00000626595 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
TCF4-255ENST00000626595 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
TCF4-255ENST00000626595 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms