RNA–Protein interactions for RNA: ENST00000613038.1

NPIPB15-202, Transcript of nuclear pore complex interacting protein family member B15, humanhuman

Gene NPIPB15, Length 457 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB15-202ENST00000613038 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
NPIPB15-202ENST00000613038 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
NPIPB15-202ENST00000613038 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
NPIPB15-202ENST00000613038 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
NPIPB15-202ENST00000613038 FOXD1Q16676 465 aa18.74■□□□□ 0.59
NPIPB15-202ENST00000613038 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
NPIPB15-202ENST00000613038 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
NPIPB15-202ENST00000613038 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
NPIPB15-202ENST00000613038 MSH5O43196 834 aa17.74■□□□□ 0.43
NPIPB15-202ENST00000613038 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
NPIPB15-202ENST00000613038 ADRA2BP18089 450 aa17.46■□□□□ 0.39
NPIPB15-202ENST00000613038 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
NPIPB15-202ENST00000613038 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
NPIPB15-202ENST00000613038 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
NPIPB15-202ENST00000613038 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
NPIPB15-202ENST00000613038 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
NPIPB15-202ENST00000613038 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
NPIPB15-202ENST00000613038 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
NPIPB15-202ENST00000613038 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
NPIPB15-202ENST00000613038 HOXD11P31277 338 aaPredicted RBP15.43■□□□□ 0.06
NPIPB15-202ENST00000613038 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
NPIPB15-202ENST00000613038 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
NPIPB15-202ENST00000613038 ABCC9O60706 1549 aa15.24■□□□□ 0.03
NPIPB15-202ENST00000613038 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
NPIPB15-202ENST00000613038 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
NPIPB15-202ENST00000613038 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
NPIPB15-202ENST00000613038 NPM3O75607 178 aaKnown RBP14.91□□□□□ -0.02
NPIPB15-202ENST00000613038 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
NPIPB15-202ENST00000613038 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
NPIPB15-202ENST00000613038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
NPIPB15-202ENST00000613038 NACADO15069 1562 aa14.77□□□□□ -0.05
NPIPB15-202ENST00000613038 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
NPIPB15-202ENST00000613038 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
NPIPB15-202ENST00000613038 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
NPIPB15-202ENST00000613038 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
NPIPB15-202ENST00000613038 KCNA4P22459 653 aa14.61□□□□□ -0.07
NPIPB15-202ENST00000613038 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
NPIPB15-202ENST00000613038 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
NPIPB15-202ENST00000613038 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
NPIPB15-202ENST00000613038 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
NPIPB15-202ENST00000613038 APLP2Q06481 763 aa14.29□□□□□ -0.12
NPIPB15-202ENST00000613038 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
NPIPB15-202ENST00000613038 CAPN15O75808 1086 aa14.24□□□□□ -0.13
NPIPB15-202ENST00000613038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
NPIPB15-202ENST00000613038 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
NPIPB15-202ENST00000613038 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
NPIPB15-202ENST00000613038 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
NPIPB15-202ENST00000613038 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
NPIPB15-202ENST00000613038 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
NPIPB15-202ENST00000613038 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
NPIPB15-202ENST00000613038 DSG3P32926 999 aa14.05□□□□□ -0.16
NPIPB15-202ENST00000613038 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
NPIPB15-202ENST00000613038 POTEHQ6S545 545 aa13.94□□□□□ -0.18
NPIPB15-202ENST00000613038 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
NPIPB15-202ENST00000613038 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
NPIPB15-202ENST00000613038 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
NPIPB15-202ENST00000613038 CECR2Q9BXF3 1484 aa13.88□□□□□ -0.19
NPIPB15-202ENST00000613038 ABCB7O75027 752 aa13.81□□□□□ -0.2
NPIPB15-202ENST00000613038 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
NPIPB15-202ENST00000613038 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
NPIPB15-202ENST00000613038 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
NPIPB15-202ENST00000613038 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
NPIPB15-202ENST00000613038 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
NPIPB15-202ENST00000613038 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
NPIPB15-202ENST00000613038 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
NPIPB15-202ENST00000613038 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
NPIPB15-202ENST00000613038 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
NPIPB15-202ENST00000613038 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
NPIPB15-202ENST00000613038 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
NPIPB15-202ENST00000613038 WIZO95785 1651 aa13.6□□□□□ -0.23
NPIPB15-202ENST00000613038 POLA2Q14181 598 aa13.59□□□□□ -0.23
NPIPB15-202ENST00000613038 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
NPIPB15-202ENST00000613038 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
NPIPB15-202ENST00000613038 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
NPIPB15-202ENST00000613038 TOP2AP11388 1531 aaKnown RBP13.45□□□□□ -0.26
NPIPB15-202ENST00000613038 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
NPIPB15-202ENST00000613038 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
NPIPB15-202ENST00000613038 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
NPIPB15-202ENST00000613038 ZBTB22O15209 634 aa13.33□□□□□ -0.28
NPIPB15-202ENST00000613038 CCDC88BA6NC98 1476 aa13.31□□□□□ -0.28
NPIPB15-202ENST00000613038 NESP48681 1621 aa13.27□□□□□ -0.29
NPIPB15-202ENST00000613038 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
NPIPB15-202ENST00000613038 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
NPIPB15-202ENST00000613038 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
NPIPB15-202ENST00000613038 CFTRP13569 1480 aa13.21□□□□□ -0.3
NPIPB15-202ENST00000613038 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
NPIPB15-202ENST00000613038 FBLN2P98095 1184 aa13.15□□□□□ -0.3
NPIPB15-202ENST00000613038 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
NPIPB15-202ENST00000613038 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
NPIPB15-202ENST00000613038 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
NPIPB15-202ENST00000613038 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
NPIPB15-202ENST00000613038 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
NPIPB15-202ENST00000613038 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.32
NPIPB15-202ENST00000613038 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
NPIPB15-202ENST00000613038 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.33
NPIPB15-202ENST00000613038 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
NPIPB15-202ENST00000613038 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
NPIPB15-202ENST00000613038 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
NPIPB15-202ENST00000613038 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
NPIPB15-202ENST00000613038 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms