RNA–Protein interactions for RNA: ENST00000608306.5

LINC00635-217, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 873 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-217ENST00000608306 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
LINC00635-217ENST00000608306 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
LINC00635-217ENST00000608306 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
LINC00635-217ENST00000608306 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
LINC00635-217ENST00000608306 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
LINC00635-217ENST00000608306 FOXD1Q16676 465 aa19.36■□□□□ 0.69
LINC00635-217ENST00000608306 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
LINC00635-217ENST00000608306 ABCC9O60706 1549 aa18.65■□□□□ 0.58
LINC00635-217ENST00000608306 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
LINC00635-217ENST00000608306 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
LINC00635-217ENST00000608306 ADRA2BP18089 450 aa18.3■□□□□ 0.52
LINC00635-217ENST00000608306 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
LINC00635-217ENST00000608306 MSH5O43196 834 aa17.99■□□□□ 0.47
LINC00635-217ENST00000608306 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
LINC00635-217ENST00000608306 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
LINC00635-217ENST00000608306 NACADO15069 1562 aa17.62■□□□□ 0.41
LINC00635-217ENST00000608306 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00635-217ENST00000608306 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
LINC00635-217ENST00000608306 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
LINC00635-217ENST00000608306 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
LINC00635-217ENST00000608306 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
LINC00635-217ENST00000608306 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
LINC00635-217ENST00000608306 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
LINC00635-217ENST00000608306 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
LINC00635-217ENST00000608306 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
LINC00635-217ENST00000608306 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
LINC00635-217ENST00000608306 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
LINC00635-217ENST00000608306 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
LINC00635-217ENST00000608306 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.27
LINC00635-217ENST00000608306 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
LINC00635-217ENST00000608306 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
LINC00635-217ENST00000608306 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
LINC00635-217ENST00000608306 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
LINC00635-217ENST00000608306 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
LINC00635-217ENST00000608306 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
LINC00635-217ENST00000608306 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
LINC00635-217ENST00000608306 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
LINC00635-217ENST00000608306 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
LINC00635-217ENST00000608306 SMARCA2P51531 1590 aa16.2■□□□□ 0.18
LINC00635-217ENST00000608306 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
LINC00635-217ENST00000608306 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
LINC00635-217ENST00000608306 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
LINC00635-217ENST00000608306 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
LINC00635-217ENST00000608306 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
LINC00635-217ENST00000608306 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
LINC00635-217ENST00000608306 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
LINC00635-217ENST00000608306 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC00635-217ENST00000608306 NESP48681 1621 aa16.04■□□□□ 0.16
LINC00635-217ENST00000608306 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
LINC00635-217ENST00000608306 CUX2O14529 1486 aa15.95■□□□□ 0.14
LINC00635-217ENST00000608306 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
LINC00635-217ENST00000608306 WIZO95785 1651 aa15.92■□□□□ 0.14
LINC00635-217ENST00000608306 KCNA4P22459 653 aa15.9■□□□□ 0.14
LINC00635-217ENST00000608306 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
LINC00635-217ENST00000608306 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
LINC00635-217ENST00000608306 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
LINC00635-217ENST00000608306 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
LINC00635-217ENST00000608306 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
LINC00635-217ENST00000608306 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
LINC00635-217ENST00000608306 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
LINC00635-217ENST00000608306 TOP2AP11388 1531 aaKnown RBP15.7■□□□□ 0.1
LINC00635-217ENST00000608306 MRC2Q9UBG0 1479 aa15.67■□□□□ 0.1
LINC00635-217ENST00000608306 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
LINC00635-217ENST00000608306 CFTRP13569 1480 aa15.65■□□□□ 0.1
LINC00635-217ENST00000608306 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
LINC00635-217ENST00000608306 WDR62O43379 1518 aa15.58■□□□□ 0.09
LINC00635-217ENST00000608306 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
LINC00635-217ENST00000608306 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
LINC00635-217ENST00000608306 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
LINC00635-217ENST00000608306 SUPT5HO00267 1087 aaKnown RBP15.41■□□□□ 0.06
LINC00635-217ENST00000608306 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
LINC00635-217ENST00000608306 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
LINC00635-217ENST00000608306 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
LINC00635-217ENST00000608306 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
LINC00635-217ENST00000608306 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
LINC00635-217ENST00000608306 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
LINC00635-217ENST00000608306 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
LINC00635-217ENST00000608306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00635-217ENST00000608306 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
LINC00635-217ENST00000608306 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00635-217ENST00000608306 FBLN2P98095 1184 aa15.21■□□□□ 0.03
LINC00635-217ENST00000608306 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
LINC00635-217ENST00000608306 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
LINC00635-217ENST00000608306 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
LINC00635-217ENST00000608306 SOGA1O94964 1423 aa15.19■□□□□ 0.02
LINC00635-217ENST00000608306 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
LINC00635-217ENST00000608306 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
LINC00635-217ENST00000608306 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
LINC00635-217ENST00000608306 TARBP1Q13395 1621 aaKnown RBP15.15■□□□□ 0.02
LINC00635-217ENST00000608306 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
LINC00635-217ENST00000608306 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
LINC00635-217ENST00000608306 CUX1P39880 1505 aa15.12■□□□□ 0.01
LINC00635-217ENST00000608306 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
LINC00635-217ENST00000608306 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
LINC00635-217ENST00000608306 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
LINC00635-217ENST00000608306 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
LINC00635-217ENST00000608306 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
LINC00635-217ENST00000608306 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
LINC00635-217ENST00000608306 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
LINC00635-217ENST00000608306 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms