RNA–Protein interactions for RNA: ENST00000607542.5

LINC00882-206, long intergenic non-protein coding RNA 882, humanhuman

TSL 3

Gene LINC00882, Length 410 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00882-206ENST00000607542 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
LINC00882-206ENST00000607542 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
LINC00882-206ENST00000607542 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
LINC00882-206ENST00000607542 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
LINC00882-206ENST00000607542 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
LINC00882-206ENST00000607542 FOXD1Q16676 465 aa18.21■□□□□ 0.51
LINC00882-206ENST00000607542 MSH5O43196 834 aa17.37■□□□□ 0.37
LINC00882-206ENST00000607542 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
LINC00882-206ENST00000607542 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
LINC00882-206ENST00000607542 ADRA2BP18089 450 aa16.36■□□□□ 0.21
LINC00882-206ENST00000607542 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
LINC00882-206ENST00000607542 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
LINC00882-206ENST00000607542 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
LINC00882-206ENST00000607542 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
LINC00882-206ENST00000607542 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
LINC00882-206ENST00000607542 ABCC9O60706 1549 aa15.12■□□□□ 0.01
LINC00882-206ENST00000607542 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
LINC00882-206ENST00000607542 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
LINC00882-206ENST00000607542 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
LINC00882-206ENST00000607542 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
LINC00882-206ENST00000607542 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
LINC00882-206ENST00000607542 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
LINC00882-206ENST00000607542 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
LINC00882-206ENST00000607542 POTEHQ6S545 545 aa14.19□□□□□ -0.14
LINC00882-206ENST00000607542 PPP4R3CPQ6ZMV5 832 aa14.14□□□□□ -0.15
LINC00882-206ENST00000607542 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC00882-206ENST00000607542 RNF216Q9NWF9 866 aaPredicted RBP14.1□□□□□ -0.15
LINC00882-206ENST00000607542 RB1CC1Q8TDY2 1594 aa14.07□□□□□ -0.16
LINC00882-206ENST00000607542 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
LINC00882-206ENST00000607542 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
LINC00882-206ENST00000607542 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
LINC00882-206ENST00000607542 NACADO15069 1562 aa13.85□□□□□ -0.19
LINC00882-206ENST00000607542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00882-206ENST00000607542 BICRAQ9NZM4 1560 aa13.7□□□□□ -0.22
LINC00882-206ENST00000607542 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
LINC00882-206ENST00000607542 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
LINC00882-206ENST00000607542 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
LINC00882-206ENST00000607542 DSG3P32926 999 aa13.54□□□□□ -0.24
LINC00882-206ENST00000607542 CAPN15O75808 1086 aa13.5□□□□□ -0.25
LINC00882-206ENST00000607542 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
LINC00882-206ENST00000607542 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
LINC00882-206ENST00000607542 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
LINC00882-206ENST00000607542 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
LINC00882-206ENST00000607542 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
LINC00882-206ENST00000607542 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
LINC00882-206ENST00000607542 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
LINC00882-206ENST00000607542 CUX2O14529 1486 aa13.18□□□□□ -0.3
LINC00882-206ENST00000607542 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
LINC00882-206ENST00000607542 ABCB7O75027 752 aa13.12□□□□□ -0.31
LINC00882-206ENST00000607542 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
LINC00882-206ENST00000607542 DCAF1Q9Y4B6 1507 aa13.1□□□□□ -0.31
LINC00882-206ENST00000607542 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
LINC00882-206ENST00000607542 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
LINC00882-206ENST00000607542 ERCC6Q03468 1493 aa13.08□□□□□ -0.32
LINC00882-206ENST00000607542 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
LINC00882-206ENST00000607542 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
LINC00882-206ENST00000607542 APLP2Q06481 763 aa12.96□□□□□ -0.33
LINC00882-206ENST00000607542 RBM42Q9BTD8 480 aaKnown RBP12.96□□□□□ -0.33
LINC00882-206ENST00000607542 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
LINC00882-206ENST00000607542 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
LINC00882-206ENST00000607542 NESP48681 1621 aa12.84□□□□□ -0.35
LINC00882-206ENST00000607542 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
LINC00882-206ENST00000607542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
LINC00882-206ENST00000607542 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
LINC00882-206ENST00000607542 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
LINC00882-206ENST00000607542 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
LINC00882-206ENST00000607542 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
LINC00882-206ENST00000607542 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
LINC00882-206ENST00000607542 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
LINC00882-206ENST00000607542 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
LINC00882-206ENST00000607542 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
LINC00882-206ENST00000607542 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
LINC00882-206ENST00000607542 BAZ1BQ9UIG0 1483 aaKnown RBP12.58□□□□□ -0.4
LINC00882-206ENST00000607542 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
LINC00882-206ENST00000607542 HAX1O00165 279 aa12.54□□□□□ -0.4
LINC00882-206ENST00000607542 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
LINC00882-206ENST00000607542 POLA2Q14181 598 aa12.53□□□□□ -0.4
LINC00882-206ENST00000607542 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
LINC00882-206ENST00000607542 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
LINC00882-206ENST00000607542 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
LINC00882-206ENST00000607542 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
LINC00882-206ENST00000607542 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
LINC00882-206ENST00000607542 WDR62O43379 1518 aa12.43□□□□□ -0.42
LINC00882-206ENST00000607542 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
LINC00882-206ENST00000607542 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
LINC00882-206ENST00000607542 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
LINC00882-206ENST00000607542 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
LINC00882-206ENST00000607542 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
LINC00882-206ENST00000607542 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
LINC00882-206ENST00000607542 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
LINC00882-206ENST00000607542 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
LINC00882-206ENST00000607542 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
LINC00882-206ENST00000607542 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
LINC00882-206ENST00000607542 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00882-206ENST00000607542 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
LINC00882-206ENST00000607542 EVX2Q03828 476 aa12.26□□□□□ -0.45
LINC00882-206ENST00000607542 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
LINC00882-206ENST00000607542 KCNA4P22459 653 aa12.22□□□□□ -0.45
LINC00882-206ENST00000607542 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
LINC00882-206ENST00000607542 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms