RNA–Protein interactions for RNA: ENST00000607398.1

RSPH3-204, Transcript of radial spoke head 3 homolog, humanhuman

TSL 3

Gene RSPH3, Length 793 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3-204ENST00000607398 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
RSPH3-204ENST00000607398 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
RSPH3-204ENST00000607398 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
RSPH3-204ENST00000607398 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
RSPH3-204ENST00000607398 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
RSPH3-204ENST00000607398 FOXD1Q16676 465 aa22.81■■□□□ 1.24
RSPH3-204ENST00000607398 PLPPR3Q6T4P5 718 aa22.45■■□□□ 1.18
RSPH3-204ENST00000607398 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
RSPH3-204ENST00000607398 ADRA2BP18089 450 aa21.6■■□□□ 1.05
RSPH3-204ENST00000607398 PIAS4Q8N2W9 510 aaPredicted RBP21.42■■□□□ 1.02
RSPH3-204ENST00000607398 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
RSPH3-204ENST00000607398 MSH5O43196 834 aa21.2■□□□□ 0.98
RSPH3-204ENST00000607398 ABCC9O60706 1549 aa21.09■□□□□ 0.97
RSPH3-204ENST00000607398 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
RSPH3-204ENST00000607398 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
RSPH3-204ENST00000607398 NACADO15069 1562 aa20.01■□□□□ 0.79
RSPH3-204ENST00000607398 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
RSPH3-204ENST00000607398 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
RSPH3-204ENST00000607398 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
RSPH3-204ENST00000607398 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
RSPH3-204ENST00000607398 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
RSPH3-204ENST00000607398 MAPK8IP2Q13387 824 aaPredicted RBP19.71■□□□□ 0.75
RSPH3-204ENST00000607398 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
RSPH3-204ENST00000607398 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
RSPH3-204ENST00000607398 DCAF1Q9Y4B6 1507 aa19.58■□□□□ 0.73
RSPH3-204ENST00000607398 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
RSPH3-204ENST00000607398 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
RSPH3-204ENST00000607398 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
RSPH3-204ENST00000607398 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
RSPH3-204ENST00000607398 KCNA4P22459 653 aa19.32■□□□□ 0.68
RSPH3-204ENST00000607398 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
RSPH3-204ENST00000607398 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
RSPH3-204ENST00000607398 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
RSPH3-204ENST00000607398 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
RSPH3-204ENST00000607398 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
RSPH3-204ENST00000607398 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
RSPH3-204ENST00000607398 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
RSPH3-204ENST00000607398 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
RSPH3-204ENST00000607398 RNF216Q9NWF9 866 aaPredicted RBP18.94■□□□□ 0.62
RSPH3-204ENST00000607398 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
RSPH3-204ENST00000607398 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
RSPH3-204ENST00000607398 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
RSPH3-204ENST00000607398 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
RSPH3-204ENST00000607398 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
RSPH3-204ENST00000607398 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
RSPH3-204ENST00000607398 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
RSPH3-204ENST00000607398 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
RSPH3-204ENST00000607398 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
RSPH3-204ENST00000607398 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
RSPH3-204ENST00000607398 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
RSPH3-204ENST00000607398 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
RSPH3-204ENST00000607398 NESP48681 1621 aa18.16■□□□□ 0.5
RSPH3-204ENST00000607398 WIZO95785 1651 aa18.12■□□□□ 0.49
RSPH3-204ENST00000607398 RNF39Q9H2S5 420 aa18.11■□□□□ 0.49
RSPH3-204ENST00000607398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
RSPH3-204ENST00000607398 CUX2O14529 1486 aa18.05■□□□□ 0.48
RSPH3-204ENST00000607398 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
RSPH3-204ENST00000607398 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
RSPH3-204ENST00000607398 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
RSPH3-204ENST00000607398 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
RSPH3-204ENST00000607398 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
RSPH3-204ENST00000607398 CACNB1Q02641 598 aaPredicted RBP17.93■□□□□ 0.46
RSPH3-204ENST00000607398 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
RSPH3-204ENST00000607398 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
RSPH3-204ENST00000607398 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
RSPH3-204ENST00000607398 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
RSPH3-204ENST00000607398 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
RSPH3-204ENST00000607398 ZBTB22O15209 634 aa17.8■□□□□ 0.44
RSPH3-204ENST00000607398 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
RSPH3-204ENST00000607398 CFTRP13569 1480 aa17.75■□□□□ 0.43
RSPH3-204ENST00000607398 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
RSPH3-204ENST00000607398 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
RSPH3-204ENST00000607398 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
RSPH3-204ENST00000607398 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
RSPH3-204ENST00000607398 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
RSPH3-204ENST00000607398 WDR62O43379 1518 aa17.71■□□□□ 0.43
RSPH3-204ENST00000607398 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
RSPH3-204ENST00000607398 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
RSPH3-204ENST00000607398 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
RSPH3-204ENST00000607398 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
RSPH3-204ENST00000607398 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
RSPH3-204ENST00000607398 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
RSPH3-204ENST00000607398 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
RSPH3-204ENST00000607398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
RSPH3-204ENST00000607398 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
RSPH3-204ENST00000607398 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
RSPH3-204ENST00000607398 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
RSPH3-204ENST00000607398 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
RSPH3-204ENST00000607398 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
RSPH3-204ENST00000607398 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
RSPH3-204ENST00000607398 CAPN15O75808 1086 aa17.32■□□□□ 0.36
RSPH3-204ENST00000607398 APLP2Q06481 763 aa17.31■□□□□ 0.36
RSPH3-204ENST00000607398 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
RSPH3-204ENST00000607398 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
RSPH3-204ENST00000607398 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
RSPH3-204ENST00000607398 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
RSPH3-204ENST00000607398 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
RSPH3-204ENST00000607398 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.35
RSPH3-204ENST00000607398 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
RSPH3-204ENST00000607398 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms