RNA–Protein interactions for RNA: ENST00000603228.1

LINC01588-214, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 5

Gene LINC01588, Length 520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-214ENST00000603228 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
LINC01588-214ENST00000603228 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
LINC01588-214ENST00000603228 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
LINC01588-214ENST00000603228 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
LINC01588-214ENST00000603228 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
LINC01588-214ENST00000603228 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
LINC01588-214ENST00000603228 ADRA2BP18089 450 aa14.43□□□□□ -0.1
LINC01588-214ENST00000603228 FOXD1Q16676 465 aa14.3□□□□□ -0.12
LINC01588-214ENST00000603228 PPP6R1Q9UPN7 881 aa14.29□□□□□ -0.12
LINC01588-214ENST00000603228 KCNA4P22459 653 aa14.11□□□□□ -0.15
LINC01588-214ENST00000603228 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
LINC01588-214ENST00000603228 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
LINC01588-214ENST00000603228 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
LINC01588-214ENST00000603228 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
LINC01588-214ENST00000603228 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
LINC01588-214ENST00000603228 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
LINC01588-214ENST00000603228 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
LINC01588-214ENST00000603228 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
LINC01588-214ENST00000603228 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
LINC01588-214ENST00000603228 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
LINC01588-214ENST00000603228 ZCCHC6Q5VYS8 1495 aaKnown RBP13.05□□□□□ -0.32
LINC01588-214ENST00000603228 ZBTB22O15209 634 aa13□□□□□ -0.33
LINC01588-214ENST00000603228 MSH5O43196 834 aa12.91□□□□□ -0.34
LINC01588-214ENST00000603228 ABCC9O60706 1549 aa12.91□□□□□ -0.34
LINC01588-214ENST00000603228 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
LINC01588-214ENST00000603228 DCAF8L2P0C7V8 631 aa12.85□□□□□ -0.35
LINC01588-214ENST00000603228 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
LINC01588-214ENST00000603228 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
LINC01588-214ENST00000603228 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
LINC01588-214ENST00000603228 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
LINC01588-214ENST00000603228 NACADO15069 1562 aa12.7□□□□□ -0.38
LINC01588-214ENST00000603228 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
LINC01588-214ENST00000603228 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
LINC01588-214ENST00000603228 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
LINC01588-214ENST00000603228 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
LINC01588-214ENST00000603228 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
LINC01588-214ENST00000603228 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
LINC01588-214ENST00000603228 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
LINC01588-214ENST00000603228 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
LINC01588-214ENST00000603228 MYCNP04198 464 aaPredicted RBP12.27□□□□□ -0.45
LINC01588-214ENST00000603228 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
LINC01588-214ENST00000603228 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
LINC01588-214ENST00000603228 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
LINC01588-214ENST00000603228 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
LINC01588-214ENST00000603228 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01588-214ENST00000603228 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
LINC01588-214ENST00000603228 FKBP8Q14318 412 aa12.14□□□□□ -0.47
LINC01588-214ENST00000603228 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
LINC01588-214ENST00000603228 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.47
LINC01588-214ENST00000603228 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
LINC01588-214ENST00000603228 BAZ1AQ9NRL2 1556 aaPredicted RBP12.02□□□□□ -0.49
LINC01588-214ENST00000603228 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
LINC01588-214ENST00000603228 SMARCA4P51532 1647 aa11.97□□□□□ -0.49
LINC01588-214ENST00000603228 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
LINC01588-214ENST00000603228 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
LINC01588-214ENST00000603228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01588-214ENST00000603228 WIZO95785 1651 aa11.9□□□□□ -0.5
LINC01588-214ENST00000603228 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
LINC01588-214ENST00000603228 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
LINC01588-214ENST00000603228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
LINC01588-214ENST00000603228 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
LINC01588-214ENST00000603228 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
LINC01588-214ENST00000603228 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
LINC01588-214ENST00000603228 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
LINC01588-214ENST00000603228 TOP2AP11388 1531 aaKnown RBP11.79□□□□□ -0.52
LINC01588-214ENST00000603228 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
LINC01588-214ENST00000603228 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
LINC01588-214ENST00000603228 BAZ1BQ9UIG0 1483 aaKnown RBP11.73□□□□□ -0.53
LINC01588-214ENST00000603228 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
LINC01588-214ENST00000603228 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
LINC01588-214ENST00000603228 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
LINC01588-214ENST00000603228 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
LINC01588-214ENST00000603228 APLP2Q06481 763 aa11.55□□□□□ -0.56
LINC01588-214ENST00000603228 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
LINC01588-214ENST00000603228 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
LINC01588-214ENST00000603228 CFTRP13569 1480 aa11.44□□□□□ -0.58
LINC01588-214ENST00000603228 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
LINC01588-214ENST00000603228 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
LINC01588-214ENST00000603228 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
LINC01588-214ENST00000603228 PROM2Q8N271 834 aa11.38□□□□□ -0.59
LINC01588-214ENST00000603228 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
LINC01588-214ENST00000603228 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
LINC01588-214ENST00000603228 FBLN2P98095 1184 aa11.35□□□□□ -0.59
LINC01588-214ENST00000603228 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
LINC01588-214ENST00000603228 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
LINC01588-214ENST00000603228 LAMC3Q9Y6N6 1575 aa11.33□□□□□ -0.6
LINC01588-214ENST00000603228 NESP48681 1621 aa11.31□□□□□ -0.6
LINC01588-214ENST00000603228 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
LINC01588-214ENST00000603228 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
LINC01588-214ENST00000603228 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
LINC01588-214ENST00000603228 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
LINC01588-214ENST00000603228 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
LINC01588-214ENST00000603228 POLA2Q14181 598 aa11.26□□□□□ -0.61
LINC01588-214ENST00000603228 TOP2BQ02880 1626 aa11.26□□□□□ -0.61
LINC01588-214ENST00000603228 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
LINC01588-214ENST00000603228 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
LINC01588-214ENST00000603228 CUX1P39880 1505 aa11.25□□□□□ -0.61
LINC01588-214ENST00000603228 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
LINC01588-214ENST00000603228 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.61
LINC01588-214ENST00000603228 CAPN15O75808 1086 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms