RNA–Protein interactions for RNA: ENST00000593146.1

APC2-208, Transcript of APC2, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC2, Length 2,897 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC2-208ENST00000593146 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
APC2-208ENST00000593146 HRCP23327 699 aa29.24■■■□□ 2.27
APC2-208ENST00000593146 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.19
APC2-208ENST00000593146 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
APC2-208ENST00000593146 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
APC2-208ENST00000593146 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
APC2-208ENST00000593146 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
APC2-208ENST00000593146 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
APC2-208ENST00000593146 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
APC2-208ENST00000593146 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
APC2-208ENST00000593146 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
APC2-208ENST00000593146 SCAF1Q9H7N4 1312 aaKnown RBP27.88■■■□□ 2.05
APC2-208ENST00000593146 ABCC9O60706 1549 aa27.66■■■□□ 2.02
APC2-208ENST00000593146 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
APC2-208ENST00000593146 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
APC2-208ENST00000593146 TRIM26Q12899 539 aaPredicted RBP27.47■■□□□ 1.99
APC2-208ENST00000593146 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
APC2-208ENST00000593146 MYT1Q01538 1121 aa27.42■■□□□ 1.98
APC2-208ENST00000593146 ZEB1P37275 1124 aaPredicted RBP27.28■■□□□ 1.96
APC2-208ENST00000593146 ACIN1Q9UKV3 1341 aaKnown RBP27.06■■□□□ 1.92
APC2-208ENST00000593146 NEUROD1Q13562 356 aa27.03■■□□□ 1.92
APC2-208ENST00000593146 GTF3C3Q9Y5Q9 886 aa26.9■■□□□ 1.9
APC2-208ENST00000593146 NACADO15069 1562 aa26.72■■□□□ 1.87
APC2-208ENST00000593146 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
APC2-208ENST00000593146 CENPBP07199 599 aaPredicted RBP26.61■■□□□ 1.85
APC2-208ENST00000593146 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.82
APC2-208ENST00000593146 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
APC2-208ENST00000593146 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
APC2-208ENST00000593146 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
APC2-208ENST00000593146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.38■■□□□ 1.81
APC2-208ENST00000593146 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
APC2-208ENST00000593146 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
APC2-208ENST00000593146 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
APC2-208ENST00000593146 YTHDC1Q96MU7 727 aaKnown RBP26.15■■□□□ 1.78
APC2-208ENST00000593146 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
APC2-208ENST00000593146 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
APC2-208ENST00000593146 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
APC2-208ENST00000593146 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
APC2-208ENST00000593146 BCL11AQ9H165 835 aa25.83■■□□□ 1.73
APC2-208ENST00000593146 MIER1Q8N108 512 aa25.78■■□□□ 1.72
APC2-208ENST00000593146 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
APC2-208ENST00000593146 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
APC2-208ENST00000593146 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
APC2-208ENST00000593146 WIZO95785 1651 aa25.66■■□□□ 1.7
APC2-208ENST00000593146 ANP32EQ9BTT0 268 aa25.65■■□□□ 1.7
APC2-208ENST00000593146 SUPT16HQ9Y5B9 1047 aaKnown RBP25.5■■□□□ 1.67
APC2-208ENST00000593146 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
APC2-208ENST00000593146 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
APC2-208ENST00000593146 TSHZ2Q9NRE2 1034 aa25.48■■□□□ 1.67
APC2-208ENST00000593146 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
APC2-208ENST00000593146 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
APC2-208ENST00000593146 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
APC2-208ENST00000593146 ABCC8Q09428 1581 aa25.32■■□□□ 1.64
APC2-208ENST00000593146 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
APC2-208ENST00000593146 CLSPNQ9HAW4 1339 aa25.25■■□□□ 1.63
APC2-208ENST00000593146 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
APC2-208ENST00000593146 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
APC2-208ENST00000593146 SOGA1O94964 1423 aa25.2■■□□□ 1.62
APC2-208ENST00000593146 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
APC2-208ENST00000593146 UBTFP17480 764 aaKnown RBP25.14■■□□□ 1.61
APC2-208ENST00000593146 SMARCA2P51531 1590 aa25.11■■□□□ 1.61
APC2-208ENST00000593146 EEA1Q15075 1411 aa25.1■■□□□ 1.61
APC2-208ENST00000593146 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
APC2-208ENST00000593146 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
APC2-208ENST00000593146 BCANQ96GW7 911 aa25.01■■□□□ 1.59
APC2-208ENST00000593146 GOLGA3Q08378 1498 aa25■■□□□ 1.59
APC2-208ENST00000593146 PRKCSHP14314 528 aaPredicted RBP24.94■■□□□ 1.58
APC2-208ENST00000593146 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
APC2-208ENST00000593146 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
APC2-208ENST00000593146 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
APC2-208ENST00000593146 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
APC2-208ENST00000593146 FKBP8Q14318 412 aa24.79■■□□□ 1.56
APC2-208ENST00000593146 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
APC2-208ENST00000593146 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
APC2-208ENST00000593146 KCNH8Q96L42 1107 aa24.78■■□□□ 1.56
APC2-208ENST00000593146 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
APC2-208ENST00000593146 CLIP1P30622 1438 aa24.76■■□□□ 1.55
APC2-208ENST00000593146 KIF21BO75037 1637 aa24.73■■□□□ 1.55
APC2-208ENST00000593146 APLP2Q06481 763 aa24.71■■□□□ 1.55
APC2-208ENST00000593146 VPS8Q8N3P4 1428 aa24.71■■□□□ 1.55
APC2-208ENST00000593146 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
APC2-208ENST00000593146 MSH5O43196 834 aa24.7■■□□□ 1.54
APC2-208ENST00000593146 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
APC2-208ENST00000593146 ITGAEP38570 1179 aa24.63■■□□□ 1.53
APC2-208ENST00000593146 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
APC2-208ENST00000593146 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
APC2-208ENST00000593146 RAPGEF2Q9Y4G8 1499 aa24.54■■□□□ 1.52
APC2-208ENST00000593146 DHX57Q6P158 1386 aaKnown RBP24.52■■□□□ 1.52
APC2-208ENST00000593146 NEFLP07196 543 aa24.49■■□□□ 1.51
APC2-208ENST00000593146 ERICH6Q7L0X2 663 aa24.41■■□□□ 1.5
APC2-208ENST00000593146 FANCIQ9NVI1 1328 aa24.34■■□□□ 1.49
APC2-208ENST00000593146 TRIM52Q96A61 297 aa24.33■■□□□ 1.49
APC2-208ENST00000593146 DEKP35659 375 aaKnown RBP24.31■■□□□ 1.48
APC2-208ENST00000593146 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
APC2-208ENST00000593146 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
APC2-208ENST00000593146 ANO8Q9HCE9 1232 aaPredicted RBP24.27■■□□□ 1.48
APC2-208ENST00000593146 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
APC2-208ENST00000593146 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
APC2-208ENST00000593146 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
APC2-208ENST00000593146 RRBP1Q9P2E9 1410 aaKnown RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms