RNA–Protein interactions for RNA: ENST00000588861.1

HDHD2-206, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

Gene HDHD2, Length 3,229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-206ENST00000588861 NISCHQ9Y2I1 1504 aa16.79■□□□□ 0.28
HDHD2-206ENST00000588861 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
HDHD2-206ENST00000588861 HRCP23327 699 aa15.85■□□□□ 0.13
HDHD2-206ENST00000588861 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
HDHD2-206ENST00000588861 PPARGC1BQ86YN6 1023 aaKnown RBP15.6■□□□□ 0.09
HDHD2-206ENST00000588861 MYT1Q01538 1121 aa15.51■□□□□ 0.07
HDHD2-206ENST00000588861 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
HDHD2-206ENST00000588861 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
HDHD2-206ENST00000588861 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
HDHD2-206ENST00000588861 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
HDHD2-206ENST00000588861 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
HDHD2-206ENST00000588861 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.04
HDHD2-206ENST00000588861 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
HDHD2-206ENST00000588861 GTF3C3Q9Y5Q9 886 aa14.74□□□□□ -0.05
HDHD2-206ENST00000588861 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
HDHD2-206ENST00000588861 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
HDHD2-206ENST00000588861 NEUROD1Q13562 356 aa14.72□□□□□ -0.05
HDHD2-206ENST00000588861 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
HDHD2-206ENST00000588861 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
HDHD2-206ENST00000588861 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
HDHD2-206ENST00000588861 LOC105371045A0A1W2PR82 267 aa14.54□□□□□ -0.08
HDHD2-206ENST00000588861 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
HDHD2-206ENST00000588861 NACADO15069 1562 aa14.45□□□□□ -0.1
HDHD2-206ENST00000588861 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
HDHD2-206ENST00000588861 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
HDHD2-206ENST00000588861 DIEXFQ68CQ4 756 aaKnown RBP14.32□□□□□ -0.12
HDHD2-206ENST00000588861 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
HDHD2-206ENST00000588861 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
HDHD2-206ENST00000588861 PRKCSHP14314 528 aaPredicted RBP14.22□□□□□ -0.13
HDHD2-206ENST00000588861 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
HDHD2-206ENST00000588861 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
HDHD2-206ENST00000588861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
HDHD2-206ENST00000588861 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
HDHD2-206ENST00000588861 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
HDHD2-206ENST00000588861 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
HDHD2-206ENST00000588861 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
HDHD2-206ENST00000588861 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
HDHD2-206ENST00000588861 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
HDHD2-206ENST00000588861 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
HDHD2-206ENST00000588861 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
HDHD2-206ENST00000588861 MIER1Q8N108 512 aa13.89□□□□□ -0.19
HDHD2-206ENST00000588861 ABCC9O60706 1549 aa13.88□□□□□ -0.19
HDHD2-206ENST00000588861 SUPT16HQ9Y5B9 1047 aaKnown RBP13.85□□□□□ -0.19
HDHD2-206ENST00000588861 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
HDHD2-206ENST00000588861 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
HDHD2-206ENST00000588861 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
HDHD2-206ENST00000588861 BCANQ96GW7 911 aa13.67□□□□□ -0.22
HDHD2-206ENST00000588861 APLP2Q06481 763 aa13.65□□□□□ -0.22
HDHD2-206ENST00000588861 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
HDHD2-206ENST00000588861 RBM19Q9Y4C8 960 aaKnown RBP13.57□□□□□ -0.24
HDHD2-206ENST00000588861 PEG3Q9GZU2 1588 aa13.5□□□□□ -0.25
HDHD2-206ENST00000588861 FKBP8Q14318 412 aa13.48□□□□□ -0.25
HDHD2-206ENST00000588861 MSH5O43196 834 aa13.45□□□□□ -0.26
HDHD2-206ENST00000588861 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
HDHD2-206ENST00000588861 ITGAEP38570 1179 aa13.41□□□□□ -0.26
HDHD2-206ENST00000588861 NEFLP07196 543 aa13.4□□□□□ -0.26
HDHD2-206ENST00000588861 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
HDHD2-206ENST00000588861 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
HDHD2-206ENST00000588861 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
HDHD2-206ENST00000588861 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
HDHD2-206ENST00000588861 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
HDHD2-206ENST00000588861 HMGXB3Q12766 1538 aa13.31□□□□□ -0.28
HDHD2-206ENST00000588861 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
HDHD2-206ENST00000588861 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
HDHD2-206ENST00000588861 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
HDHD2-206ENST00000588861 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
HDHD2-206ENST00000588861 NBR1Q14596 966 aa13.24□□□□□ -0.29
HDHD2-206ENST00000588861 UBE2Q2Q8WVN8 375 aa13.23□□□□□ -0.29
HDHD2-206ENST00000588861 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
HDHD2-206ENST00000588861 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
HDHD2-206ENST00000588861 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
HDHD2-206ENST00000588861 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
HDHD2-206ENST00000588861 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
HDHD2-206ENST00000588861 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
HDHD2-206ENST00000588861 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
HDHD2-206ENST00000588861 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
HDHD2-206ENST00000588861 NCAPD3P42695 1498 aa13.12□□□□□ -0.31
HDHD2-206ENST00000588861 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
HDHD2-206ENST00000588861 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
HDHD2-206ENST00000588861 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
HDHD2-206ENST00000588861 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
HDHD2-206ENST00000588861 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
HDHD2-206ENST00000588861 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
HDHD2-206ENST00000588861 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
HDHD2-206ENST00000588861 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
HDHD2-206ENST00000588861 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
HDHD2-206ENST00000588861 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
HDHD2-206ENST00000588861 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
HDHD2-206ENST00000588861 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
HDHD2-206ENST00000588861 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
HDHD2-206ENST00000588861 PKNOX2Q96KN3 472 aa12.98□□□□□ -0.33
HDHD2-206ENST00000588861 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
HDHD2-206ENST00000588861 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
HDHD2-206ENST00000588861 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
HDHD2-206ENST00000588861 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
HDHD2-206ENST00000588861 ANP32CO43423 234 aa12.89□□□□□ -0.35
HDHD2-206ENST00000588861 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
HDHD2-206ENST00000588861 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
HDHD2-206ENST00000588861 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
HDHD2-206ENST00000588861 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms