RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
SSC5D-203ENST00000588254 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
SSC5D-203ENST00000588254 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
SSC5D-203ENST00000588254 PCGF6Q9BYE7 350 aa28.21■■■□□ 2.11
SSC5D-203ENST00000588254 HRCP23327 699 aa28.19■■■□□ 2.1
SSC5D-203ENST00000588254 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
SSC5D-203ENST00000588254 MYO15BQ96JP2 1530 aa27.99■■■□□ 2.07
SSC5D-203ENST00000588254 DCAF8L2P0C7V8 631 aa27.94■■■□□ 2.06
SSC5D-203ENST00000588254 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
SSC5D-203ENST00000588254 LOC105371045A0A1W2PR82 267 aa27.57■■■□□ 2
SSC5D-203ENST00000588254 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
SSC5D-203ENST00000588254 EHMT2Q96KQ7 1210 aa27.15■■□□□ 1.94
SSC5D-203ENST00000588254 TRIM26Q12899 539 aaPredicted RBP26.96■■□□□ 1.91
SSC5D-203ENST00000588254 FAM9AQ8IZU1 332 aaPredicted RBP26.91■■□□□ 1.9
SSC5D-203ENST00000588254 DCAF1Q9Y4B6 1507 aa26.86■■□□□ 1.89
SSC5D-203ENST00000588254 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
SSC5D-203ENST00000588254 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
SSC5D-203ENST00000588254 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
SSC5D-203ENST00000588254 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
SSC5D-203ENST00000588254 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
SSC5D-203ENST00000588254 PELP1Q8IZL8 1130 aaKnown RBP26.33■■□□□ 1.81
SSC5D-203ENST00000588254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.29■■□□□ 1.8
SSC5D-203ENST00000588254 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
SSC5D-203ENST00000588254 NEUROD1Q13562 356 aa26.12■■□□□ 1.77
SSC5D-203ENST00000588254 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
SSC5D-203ENST00000588254 GTF3C3Q9Y5Q9 886 aa25.98■■□□□ 1.75
SSC5D-203ENST00000588254 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
SSC5D-203ENST00000588254 RB1CC1Q8TDY2 1594 aa25.88■■□□□ 1.73
SSC5D-203ENST00000588254 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
SSC5D-203ENST00000588254 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
SSC5D-203ENST00000588254 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
SSC5D-203ENST00000588254 ABCC9O60706 1549 aa25.81■■□□□ 1.72
SSC5D-203ENST00000588254 CENPBP07199 599 aaPredicted RBP25.7■■□□□ 1.71
SSC5D-203ENST00000588254 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
SSC5D-203ENST00000588254 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
SSC5D-203ENST00000588254 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.64
SSC5D-203ENST00000588254 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
SSC5D-203ENST00000588254 ZNF316A6NFI3 1004 aaPredicted RBP25.3■■□□□ 1.64
SSC5D-203ENST00000588254 MIER1Q8N108 512 aa25.29■■□□□ 1.64
SSC5D-203ENST00000588254 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
SSC5D-203ENST00000588254 WIZO95785 1651 aa25.21■■□□□ 1.63
SSC5D-203ENST00000588254 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
SSC5D-203ENST00000588254 CEP162Q5TB80 1403 aa25.14■■□□□ 1.61
SSC5D-203ENST00000588254 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
SSC5D-203ENST00000588254 SOGA1O94964 1423 aa25.08■■□□□ 1.6
SSC5D-203ENST00000588254 MYT1Q01538 1121 aa25.02■■□□□ 1.6
SSC5D-203ENST00000588254 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
SSC5D-203ENST00000588254 CSRNP3Q8WYN3 585 aa24.93■■□□□ 1.58
SSC5D-203ENST00000588254 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
SSC5D-203ENST00000588254 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
SSC5D-203ENST00000588254 APLP2Q06481 763 aa24.77■■□□□ 1.56
SSC5D-203ENST00000588254 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
SSC5D-203ENST00000588254 BCANQ96GW7 911 aa24.67■■□□□ 1.54
SSC5D-203ENST00000588254 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
SSC5D-203ENST00000588254 SUPT16HQ9Y5B9 1047 aaKnown RBP24.65■■□□□ 1.54
SSC5D-203ENST00000588254 ITGAEP38570 1179 aa24.61■■□□□ 1.53
SSC5D-203ENST00000588254 NACADO15069 1562 aa24.6■■□□□ 1.53
SSC5D-203ENST00000588254 PABPN1Q86U42 306 aaKnown RBP eCLIP24.59■■□□□ 1.53
SSC5D-203ENST00000588254 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
SSC5D-203ENST00000588254 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
SSC5D-203ENST00000588254 CLIP1P30622 1438 aa24.54■■□□□ 1.52
SSC5D-203ENST00000588254 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
SSC5D-203ENST00000588254 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
SSC5D-203ENST00000588254 TSHZ2Q9NRE2 1034 aa24.44■■□□□ 1.5
SSC5D-203ENST00000588254 EEA1Q15075 1411 aa24.37■■□□□ 1.49
SSC5D-203ENST00000588254 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
SSC5D-203ENST00000588254 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.48
SSC5D-203ENST00000588254 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
SSC5D-203ENST00000588254 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
SSC5D-203ENST00000588254 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
SSC5D-203ENST00000588254 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
SSC5D-203ENST00000588254 HIRIP3Q9BW71 556 aaPredicted RBP24.29■■□□□ 1.48
SSC5D-203ENST00000588254 FKBP8Q14318 412 aa24.27■■□□□ 1.48
SSC5D-203ENST00000588254 ANP32EQ9BTT0 268 aa24.24■■□□□ 1.47
SSC5D-203ENST00000588254 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
SSC5D-203ENST00000588254 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
SSC5D-203ENST00000588254 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
SSC5D-203ENST00000588254 KIF21BO75037 1637 aa24.12■■□□□ 1.45
SSC5D-203ENST00000588254 BCL11AQ9H165 835 aa24.09■■□□□ 1.45
SSC5D-203ENST00000588254 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
SSC5D-203ENST00000588254 SIN3AQ96ST3 1273 aa24.07■■□□□ 1.44
SSC5D-203ENST00000588254 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
SSC5D-203ENST00000588254 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
SSC5D-203ENST00000588254 NEFLP07196 543 aa23.98■■□□□ 1.43
SSC5D-203ENST00000588254 IRX6P78412 446 aaPredicted RBP23.97■■□□□ 1.43
SSC5D-203ENST00000588254 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
SSC5D-203ENST00000588254 RBM19Q9Y4C8 960 aaKnown RBP23.94■■□□□ 1.42
SSC5D-203ENST00000588254 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.41
SSC5D-203ENST00000588254 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
SSC5D-203ENST00000588254 CCNB3Q8WWL7 1395 aa23.88■■□□□ 1.41
SSC5D-203ENST00000588254 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SSC5D-203ENST00000588254 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
SSC5D-203ENST00000588254 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
SSC5D-203ENST00000588254 ANP32CO43423 234 aa23.75■■□□□ 1.39
SSC5D-203ENST00000588254 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
SSC5D-203ENST00000588254 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
SSC5D-203ENST00000588254 MSH5O43196 834 aa23.7■■□□□ 1.39
SSC5D-203ENST00000588254 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
SSC5D-203ENST00000588254 MAPKBP1O60336 1514 aa23.66■■□□□ 1.38
SSC5D-203ENST00000588254 ATAD2BQ9ULI0 1458 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms