RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 NISCHQ9Y2I1 1504 aa37.72■■■■□ 3.63
CACTIN-204ENST00000585942 SHROOM4Q9ULL8 1493 aa32.58■■■□□ 2.81
CACTIN-204ENST00000585942 SUPT5HO00267 1087 aaKnown RBP32.03■■■□□ 2.72
CACTIN-204ENST00000585942 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
CACTIN-204ENST00000585942 CCDC180Q9P1Z9 1646 aa31.81■■■□□ 2.68
CACTIN-204ENST00000585942 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
CACTIN-204ENST00000585942 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
CACTIN-204ENST00000585942 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
CACTIN-204ENST00000585942 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
CACTIN-204ENST00000585942 PCGF6Q9BYE7 350 aa30.4■■■□□ 2.46
CACTIN-204ENST00000585942 HRCP23327 699 aa30.37■■■□□ 2.45
CACTIN-204ENST00000585942 LOC105371045A0A1W2PR82 267 aa30.33■■■□□ 2.45
CACTIN-204ENST00000585942 ABCC9O60706 1549 aa30.1■■■□□ 2.41
CACTIN-204ENST00000585942 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
CACTIN-204ENST00000585942 RSF1Q96T23 1441 aaPredicted RBP29.99■■■□□ 2.39
CACTIN-204ENST00000585942 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
CACTIN-204ENST00000585942 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
CACTIN-204ENST00000585942 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
CACTIN-204ENST00000585942 TRIM26Q12899 539 aaPredicted RBP29.64■■■□□ 2.34
CACTIN-204ENST00000585942 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
CACTIN-204ENST00000585942 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
CACTIN-204ENST00000585942 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
CACTIN-204ENST00000585942 EHMT2Q96KQ7 1210 aa29.49■■■□□ 2.31
CACTIN-204ENST00000585942 NACADO15069 1562 aa29.44■■■□□ 2.3
CACTIN-204ENST00000585942 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
CACTIN-204ENST00000585942 WIZO95785 1651 aa29.26■■■□□ 2.27
CACTIN-204ENST00000585942 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.23
CACTIN-204ENST00000585942 ZEB1P37275 1124 aaPredicted RBP28.93■■■□□ 2.22
CACTIN-204ENST00000585942 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
CACTIN-204ENST00000585942 SCAF1Q9H7N4 1312 aaKnown RBP28.75■■■□□ 2.19
CACTIN-204ENST00000585942 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
CACTIN-204ENST00000585942 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
CACTIN-204ENST00000585942 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
CACTIN-204ENST00000585942 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
CACTIN-204ENST00000585942 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CACTIN-204ENST00000585942 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
CACTIN-204ENST00000585942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
CACTIN-204ENST00000585942 TTBK1Q5TCY1 1321 aaPredicted RBP28.55■■■□□ 2.16
CACTIN-204ENST00000585942 PABPN1Q86U42 306 aaKnown RBP eCLIP28.53■■■□□ 2.16
CACTIN-204ENST00000585942 SOGA1O94964 1423 aa28.51■■■□□ 2.16
CACTIN-204ENST00000585942 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
CACTIN-204ENST00000585942 MYT1Q01538 1121 aa28.42■■■□□ 2.14
CACTIN-204ENST00000585942 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.14
CACTIN-204ENST00000585942 CEP162Q5TB80 1403 aa28.38■■■□□ 2.13
CACTIN-204ENST00000585942 CSRNP3Q8WYN3 585 aa28.33■■■□□ 2.13
CACTIN-204ENST00000585942 UBTFP17480 764 aaKnown RBP28.32■■■□□ 2.12
CACTIN-204ENST00000585942 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.125e-6■■■■■ 54.3
CACTIN-204ENST00000585942 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
CACTIN-204ENST00000585942 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
CACTIN-204ENST00000585942 EEA1Q15075 1411 aa28.15■■■□□ 2.1
CACTIN-204ENST00000585942 GOLGA3Q08378 1498 aa28.06■■■□□ 2.08
CACTIN-204ENST00000585942 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
CACTIN-204ENST00000585942 SYNJ1O43426 1573 aa28■■■□□ 2.07
CACTIN-204ENST00000585942 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
CACTIN-204ENST00000585942 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
CACTIN-204ENST00000585942 DIEXFQ68CQ4 756 aaKnown RBP27.94■■■□□ 2.06
CACTIN-204ENST00000585942 RANGAP1P46060 587 aaPredicted RBP27.88■■■□□ 2.05
CACTIN-204ENST00000585942 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
CACTIN-204ENST00000585942 CEP164Q9UPV0 1460 aa27.87■■■□□ 2.05
CACTIN-204ENST00000585942 NEUROD1Q13562 356 aa27.87■■■□□ 2.05
CACTIN-204ENST00000585942 HNRNPUL2Q1KMD3 747 aaKnown RBP27.83■■■□□ 2.05
CACTIN-204ENST00000585942 CLIP1P30622 1438 aa27.82■■■□□ 2.04
CACTIN-204ENST00000585942 KIF21BO75037 1637 aa27.78■■■□□ 2.04
CACTIN-204ENST00000585942 RAPGEF2Q9Y4G8 1499 aa27.77■■■□□ 2.04
CACTIN-204ENST00000585942 GTF3C3Q9Y5Q9 886 aa27.75■■■□□ 2.03
CACTIN-204ENST00000585942 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
CACTIN-204ENST00000585942 ZNF316A6NFI3 1004 aaPredicted RBP27.65■■■□□ 2.02
CACTIN-204ENST00000585942 APLP2Q06481 763 aa27.64■■■□□ 2.02
CACTIN-204ENST00000585942 TOP2BQ02880 1626 aa27.56■■■□□ 2
CACTIN-204ENST00000585942 CENPBP07199 599 aaPredicted RBP27.54■■■□□ 2
CACTIN-204ENST00000585942 YTHDC1Q96MU7 727 aaKnown RBP27.41■■□□□ 1.98
CACTIN-204ENST00000585942 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
CACTIN-204ENST00000585942 PRXQ9BXM0 1461 aa27.39■■□□□ 1.97
CACTIN-204ENST00000585942 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
CACTIN-204ENST00000585942 MIER1Q8N108 512 aa27.37■■□□□ 1.97
CACTIN-204ENST00000585942 CUX1P39880 1505 aa27.34■■□□□ 1.97
CACTIN-204ENST00000585942 NCAPD3P42695 1498 aa27.33■■□□□ 1.97
CACTIN-204ENST00000585942 ARAP1Q96P48 1450 aa27.33■■□□□ 1.97
CACTIN-204ENST00000585942 ERICH3Q5RHP9 1530 aa27.3■■□□□ 1.96
CACTIN-204ENST00000585942 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
CACTIN-204ENST00000585942 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
CACTIN-204ENST00000585942 CFTRP13569 1480 aa27.18■■□□□ 1.94
CACTIN-204ENST00000585942 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
CACTIN-204ENST00000585942 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
CACTIN-204ENST00000585942 ITGAEP38570 1179 aa27.08■■□□□ 1.93
CACTIN-204ENST00000585942 RRBP1Q9P2E9 1410 aaKnown RBP27.03■■□□□ 1.92
CACTIN-204ENST00000585942 CLSPNQ9HAW4 1339 aa27.03■■□□□ 1.92
CACTIN-204ENST00000585942 IGF1RP08069 1367 aa27■■□□□ 1.91
CACTIN-204ENST00000585942 CUX2O14529 1486 aa27■■□□□ 1.91
CACTIN-204ENST00000585942 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
CACTIN-204ENST00000585942 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
CACTIN-204ENST00000585942 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
CACTIN-204ENST00000585942 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
CACTIN-204ENST00000585942 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
CACTIN-204ENST00000585942 RAB3GAP2Q9H2M9 1393 aa26.8■■□□□ 1.88
CACTIN-204ENST00000585942 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
CACTIN-204ENST00000585942 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
CACTIN-204ENST00000585942 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
CACTIN-204ENST00000585942 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
CACTIN-204ENST00000585942 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms