RNA–Protein interactions for RNA: ENST00000580866.2

EPB41L3-221, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-221ENST00000580866 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
EPB41L3-221ENST00000580866 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
EPB41L3-221ENST00000580866 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
EPB41L3-221ENST00000580866 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
EPB41L3-221ENST00000580866 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
EPB41L3-221ENST00000580866 FOXD1Q16676 465 aa13.6□□□□□ -0.23
EPB41L3-221ENST00000580866 MSH5O43196 834 aa13.03□□□□□ -0.32
EPB41L3-221ENST00000580866 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
EPB41L3-221ENST00000580866 PPP6R1Q9UPN7 881 aa12□□□□□ -0.49
EPB41L3-221ENST00000580866 ADRA2BP18089 450 aa11.84□□□□□ -0.51
EPB41L3-221ENST00000580866 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
EPB41L3-221ENST00000580866 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
EPB41L3-221ENST00000580866 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
EPB41L3-221ENST00000580866 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
EPB41L3-221ENST00000580866 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
EPB41L3-221ENST00000580866 POTEHQ6S545 545 aa11.08□□□□□ -0.64
EPB41L3-221ENST00000580866 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
EPB41L3-221ENST00000580866 DCAF8L1A6NGE4 600 aa10.73□□□□□ -0.69
EPB41L3-221ENST00000580866 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
EPB41L3-221ENST00000580866 HOXD11P31277 338 aaPredicted RBP10.54□□□□□ -0.72
EPB41L3-221ENST00000580866 NISCHQ9Y2I1 1504 aa10.5□□□□□ -0.73
EPB41L3-221ENST00000580866 PPP4R3CPQ6ZMV5 832 aa10.38□□□□□ -0.75
EPB41L3-221ENST00000580866 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
EPB41L3-221ENST00000580866 ABCC9O60706 1549 aa10.26□□□□□ -0.77
EPB41L3-221ENST00000580866 RNF216Q9NWF9 866 aaPredicted RBP10.15□□□□□ -0.78
EPB41L3-221ENST00000580866 KCNA4P22459 653 aa10.12□□□□□ -0.79
EPB41L3-221ENST00000580866 NCBP3Q53F19 620 aaKnown RBP10.11□□□□□ -0.79
EPB41L3-221ENST00000580866 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
EPB41L3-221ENST00000580866 DSG3P32926 999 aa10.05□□□□□ -0.8
EPB41L3-221ENST00000580866 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
EPB41L3-221ENST00000580866 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
EPB41L3-221ENST00000580866 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
EPB41L3-221ENST00000580866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.89□□□□□ -0.83
EPB41L3-221ENST00000580866 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
EPB41L3-221ENST00000580866 CAPN15O75808 1086 aa9.76□□□□□ -0.85
EPB41L3-221ENST00000580866 CHRDL2Q6WN34 429 aa9.74□□□□□ -0.85
EPB41L3-221ENST00000580866 U3KPZ7 1027 aaPredicted RBP9.71□□□□□ -0.86
EPB41L3-221ENST00000580866 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
EPB41L3-221ENST00000580866 SLC4A1APQ9BWU0 796 aaKnown RBP9.64□□□□□ -0.87
EPB41L3-221ENST00000580866 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
EPB41L3-221ENST00000580866 RBM42Q9BTD8 480 aaKnown RBP9.52□□□□□ -0.89
EPB41L3-221ENST00000580866 ABCB7O75027 752 aa9.49□□□□□ -0.89
EPB41L3-221ENST00000580866 PABPN1Q86U42 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
EPB41L3-221ENST00000580866 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
EPB41L3-221ENST00000580866 SLC4A2P04920 1241 aa9.38□□□□□ -0.91
EPB41L3-221ENST00000580866 TRHP20396 242 aaPredicted RBP9.38□□□□□ -0.91
EPB41L3-221ENST00000580866 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
EPB41L3-221ENST00000580866 NACADO15069 1562 aa9.35□□□□□ -0.91
EPB41L3-221ENST00000580866 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
EPB41L3-221ENST00000580866 CECR2Q9BXF3 1484 aa9.34□□□□□ -0.91
EPB41L3-221ENST00000580866 HAX1O00165 279 aa9.33□□□□□ -0.92
EPB41L3-221ENST00000580866 PIP4P2Q8N4L2 257 aa9.33□□□□□ -0.92
EPB41L3-221ENST00000580866 FOXD4L1Q9NU39 408 aa9.3□□□□□ -0.92
EPB41L3-221ENST00000580866 EVX2Q03828 476 aa9.29□□□□□ -0.92
EPB41L3-221ENST00000580866 UNC13AQ9UPW8 1703 aa9.28□□□□□ -0.92
EPB41L3-221ENST00000580866 ZBTB22O15209 634 aa9.28□□□□□ -0.92
EPB41L3-221ENST00000580866 LHX8Q68G74 356 aa9.28□□□□□ -0.92
EPB41L3-221ENST00000580866 BICRAQ9NZM4 1560 aa9.27□□□□□ -0.93
EPB41L3-221ENST00000580866 CC2D2AQ9P2K1 1620 aa9.27□□□□□ -0.93
EPB41L3-221ENST00000580866 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
EPB41L3-221ENST00000580866 CUX2O14529 1486 aa9.18□□□□□ -0.94
EPB41L3-221ENST00000580866 MYCNP04198 464 aaPredicted RBP9.18□□□□□ -0.94
EPB41L3-221ENST00000580866 APLP2Q06481 763 aa9.17□□□□□ -0.94
EPB41L3-221ENST00000580866 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
EPB41L3-221ENST00000580866 TRIM41Q8WV44 630 aa9.14□□□□□ -0.95
EPB41L3-221ENST00000580866 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
EPB41L3-221ENST00000580866 SHROOM4Q9ULL8 1493 aa9.14□□□□□ -0.95
EPB41L3-221ENST00000580866 DCAF8L2P0C7V8 631 aa9.13□□□□□ -0.95
EPB41L3-221ENST00000580866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
EPB41L3-221ENST00000580866 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
EPB41L3-221ENST00000580866 EIF4G1Q04637 1599 aaKnown RBP9.09□□□□□ -0.95
EPB41L3-221ENST00000580866 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
EPB41L3-221ENST00000580866 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
EPB41L3-221ENST00000580866 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
EPB41L3-221ENST00000580866 PITPNM1O00562 1244 aa9□□□□□ -0.97
EPB41L3-221ENST00000580866 GABBR2O75899 941 aa8.97□□□□□ -0.97
EPB41L3-221ENST00000580866 ATF5Q9Y2D1 282 aaPredicted RBP8.96□□□□□ -0.98
EPB41L3-221ENST00000580866 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
EPB41L3-221ENST00000580866 POLA2Q14181 598 aa8.94□□□□□ -0.98
EPB41L3-221ENST00000580866 ERCC6Q03468 1493 aa8.91□□□□□ -0.98
EPB41L3-221ENST00000580866 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
EPB41L3-221ENST00000580866 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
EPB41L3-221ENST00000580866 POTEMA6NI47 508 aa8.79□□□□□ -1
EPB41L3-221ENST00000580866 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
EPB41L3-221ENST00000580866 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
EPB41L3-221ENST00000580866 PRKAR2AP13861 404 aaKnown RBP8.71□□□□□ -1.02
EPB41L3-221ENST00000580866 OSCARQ8IYS5 282 aa8.71□□□□□ -1.02
EPB41L3-221ENST00000580866 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
EPB41L3-221ENST00000580866 PCDH10Q9P2E7 1040 aa8.68□□□□□ -1.02
EPB41L3-221ENST00000580866 NCAPD3P42695 1498 aa8.67□□□□□ -1.02
EPB41L3-221ENST00000580866 THOC2Q8NI27 1593 aaKnown RBP8.67□□□□□ -1.02
EPB41L3-221ENST00000580866 OTUD5Q96G74 571 aa8.66□□□□□ -1.02
EPB41L3-221ENST00000580866 ZBTB12Q9Y330 459 aaPredicted RBP8.64□□□□□ -1.03
EPB41L3-221ENST00000580866 NESP48681 1621 aa8.63□□□□□ -1.03
EPB41L3-221ENST00000580866 FBLN2P98095 1184 aa8.6□□□□□ -1.03
EPB41L3-221ENST00000580866 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
EPB41L3-221ENST00000580866 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
EPB41L3-221ENST00000580866 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
EPB41L3-221ENST00000580866 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
EPB41L3-221ENST00000580866 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms